Publications by authors named "S V Shabalina"

Microproteins encoded by small open reading frames (smORFs) comprise the "dark matter" of proteomes. Although functional microproteins were identified in diverse organisms from all three domains of life, bacterial smORFs remain poorly characterized. In this comprehensive study of intergenic smORFs (ismORFs, 15-70 codons) in 5,668 bacterial genomes of the family Enterobacteriaceae, we identified 67,297 clusters of ismORFs subject to purifying selection.

View Article and Find Full Text PDF

Ribosomal DNA (rDNA) repeat units are organized into tandem clusters in eukaryotic cells. In mice, these clusters are located on at least eight chromosomes and show extensive variation in the number of repeats between mouse genomes. To analyze intra- and inter-genomic variation of mouse rDNA repeats, we selectively isolated 25 individual rDNA units using Transformation-Associated Recombination (TAR) cloning.

View Article and Find Full Text PDF
Article Synopsis
  • The study analyzes factors affecting COVID-19 mortality rates in U.S. states from February 2020 to April 2023, revealing significant disparities linked to life expectancy, vaccination rates, and GDP per capita.
  • States with lower life expectancy and GDP faced higher mortality rates, particularly before widespread vaccination, where those with lower vaccination rates saw nearly double the deaths during peak variants.
  • Ultimately, the findings emphasize that high vaccination rates were the most crucial factor in reducing excess deaths, outperforming economic status in importance.
View Article and Find Full Text PDF

Aim: To evaluate the effect of vaccination/booster administration dynamics on the reduction of excess mortality during COVID-19 infection waves in European countries.

Methods: We selected twenty-nine countries from the OurWorldInData project database according to their population size of more than one million and the availability of information on dominant SARS-CoV-2 variants during COVID-19 infection waves. After selection, we categorized countries according to their "faster" or "slower" vaccination rates.

View Article and Find Full Text PDF

Aim To evaluate the effect of vaccination/booster administration dynamics on the reduction of excess mortality during COVID-19 infection waves in European countries. Methods We selected twenty-nine countries from the OurWorldInData project database according to their population size of more than one million and the availability of information on dominant SARS-CoV-2 variants during COVID-19 infection waves. After selection, we categorized countries according to their ″faster″ or ″slower″ vaccination rates.

View Article and Find Full Text PDF