Publications by authors named "S N Kuchin"

A new platform has been developed to facilitate the production of biologically active proteins and peptides in Escherichia coli. The platform includes an N-terminal self-associating L KD peptide fused to the SUMO protein (small ubiquitin-like protein modifier) from the yeast Saccharomyces cerevisiae, which is known for its chaperone activity. The target proteins are fused at the C termini of the L KD-SUMO fusions, and the resulting three-component fusion proteins are synthesized and self-assembled in E.

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Protein nanoparticles (NPs) can be used as vaccine platforms for target antigen presentation. To conduct a proof-of-concept study to demonstrate that an effective NP platform can be built based on a short self-assembling peptide (SAP) rather than a large self-assembling protein. SUMO-based protein fusions (SFs) containing an N-terminal SAP and a C-terminal antigen were designed, expressed in  and purified.

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Article Synopsis
  • Ykt6 is a SNARE protein that plays a crucial role in vesicular fusion, transitioning between active and inactive forms in different cellular compartments.
  • Research showed that Ykt6 is phosphorylated at a specific site influenced by calcium signaling, which triggers a change in its shape from a closed to an open form.
  • This open form alters Ykt6's interactions with other proteins, which can disrupt secretory and autophagy pathways, potentially increasing toxicity in models of Parkinson's disease.
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Snf1 protein kinase of the yeast is a member of the highly conserved eukaryotic AMP-activated protein kinase (AMPK) family, which is involved in regulating responses to energy limitation. Under conditions of carbon/energy stress, such as during glucose depletion, Snf1 is catalytically activated and enriched in the nucleus to regulate transcription. Snf1 catalytic activation requires phosphorylation of its conserved activation loop threonine (Thr210) by upstream kinases.

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Transmembrane proteins known as G protein-coupled receptors (GPCRs) have been shown to form functional homo- or hetero-oligomeric complexes, although agreement has been slow to emerge on whether homo-oligomerization plays functional roles. Here we introduce a platform to determine the identity and abundance of differing quaternary structures formed by GPCRs in living cells following changes in environmental conditions, such as changes in concentrations. The method capitalizes on the intrinsic capability of FRET spectrometry to extract oligomer geometrical information from distributions of FRET efficiencies (or FRET spectrograms) determined from pixel-level imaging of cells, combined with the ability of the statistical ensemble approaches to FRET to probe the proportion of different quaternary structures (such as dimers, rhombus or parallelogram shaped tetramers, etc.

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