Publications by authors named "S J Ruzicka"

Correction for 'Folding kinetics of a polymer' by Štěpán Růžička et al., Phys. Chem.

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Stiff, elongated biomolecules such as filamentous viruses, DNA or cellulose nanocrystals are known to form liquid crystals often exhibiting a helical supramolecular organization. Little is known about the microscopic origin, size and handedness of the helical pitch in these, so-called cholesteric phases. Experimental observations in chiral lyotropics suggest that long-ranged chiral forces of electrostatic origin acting between the mesogens are responsible for such organization.

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Experiments done on polydisperse particles of cadmium selenide have recently shown that the particles form spherical isolated clusters with low polydispersity of cluster size. The computer simulation model of Xia et al. ( Nat.

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Supercooled colloidal or molecular systems at low densities are known to form liquid, crystalline or glassy drops, which may remain isolated for a long time before they aggregate. This paper analyses the properties of this large time window, and how it can be tackled by computer simulation. We use single-particle and virtual move Monte Carlo simulations of short-range attractive spheres which are undercooled to the temperature region, where the spinodal intersects the attractive glass line.

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Virtual move Monte Carlo is a cluster algorithm which was originally developed for strongly attractive colloidal, molecular, or atomistic systems in order to both approximate the collective dynamics and avoid sampling of unphysical kinetic traps. In this paper, we present the algorithm in the form, which selects the moving cluster through a wider class of virtual states and which is applicable to general pairwise interactions, including hard-core repulsion. The newly proposed way of selecting the cluster increases the acceptance probability by up to several orders of magnitude, especially for rotational moves.

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