Publications by authors named "S Bukhdruker"

The primary goal of our work is to provide structural insights into the influence of the hydrophobic lipid environment on the membrane proteins (MPs) structure and function. Our work will not cover the well-studied hydrophobic mismatch between the lipid bilayer and MPs. Instead, we will focus on the less-studied direct molecular interactions of lipids with the hydrophobic surfaces of MPs.

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Article Synopsis
  • Interleukin-6 (IL-6) is a crucial cytokine involved in immune regulation, hematopoiesis, and the body's acute phase response, with overproduction linked to chronic inflammatory diseases like rheumatoid arthritis and severe cases of COVID-19.
  • Researchers have theorized for over two decades that IL-6 can form a dimer (two linked molecules) through a domain-swap mechanism, particularly in the context of certain cancers, but no structural evidence has been presented until now.
  • The newly presented crystal structure of the IL-6 dimer reveals its antagonistic role against the IL-6 monomer in signaling, which could lead to better insights and advancements in therapies targeting IL-6.
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Heliorhodopsins (HeRs) constitute a novel and distinct group of microbial rhodopsins, characterized by the inverted position of C- and N- termini relative to conventional Type I rhodopsins. The production of HeRs for structural and functional investigations has proven challenging, as evidenced by the structural elucidation of only two proteins and the functional characterization of a few others to date. Notably, no eukaryotic HeRs have been reported thus far.

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The technique of time-resolved macromolecular crystallography (TR-MX) has recently been rejuvenated at synchrotrons, resulting in the design of dedicated beamlines. Using pump-probe schemes, this should make the mechanistic study of photoactive proteins and other suitable systems possible with time resolutions down to microseconds. In order to identify relevant time delays, time-resolved spectroscopic experiments directly performed on protein crystals are often desirable.

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Proton transport is indispensable for cell life. It is believed that molecular mechanisms of proton movement through different types of proton-conducting molecules have general universal features. However, elucidation of such mechanisms is a challenge.

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