A density functional theory study of the active site structure and features of the oxygen tolerant [NiFeSe] Hase in the oxidized as-isolated state of the enzyme D. vulgaris Hildenborough (DvH) is reported here. The three conformers reported to be present in the X-ray structure (PDB ID: ) have been studied.
View Article and Find Full Text PDFThe possibility of simultaneous addition of η(2)-H2 to both the metals (Ni and Fe) in the active site of the as isolated state of the enzyme (Ni-SI) is examined here by an atom-by-atom electronic energy partitioning based on the QTAIM method. Results show that the 4LS state prefers H2 removal than addition. Destabilization of the atomic basins of the thiolate bridges and decrease of the electrophilicity of the Fe and Ni, resulting in poor back donation to the CO ligand, are the bottlenecks that hamper dihydrogen activation simultaneously.
View Article and Find Full Text PDFHypercoordination in silicon has long been reviewed. Dihalogenated perhalocyclohexasilane inverse sandwich complexes (ISCs) are the only group of hypercoordinate Si complexes with anion donors that contact six neutral silicon atoms; opening prospective applications in Si self-assembled nanostructures. Hypercoordinate bonds in 16 such ISCs were studied and their anion ring interactions have been understood with respect to halides.
View Article and Find Full Text PDFLike siloles, benzosiloles have low lying LUMOs due to σ*-π* conjugation between Si and the butadiene moiety but are more amenable for structural tuning. In total, 27 benzosiloles, 12 of them already synthesized and another 15 newly reported here, have been investigated using DFT and TDDFT calculations with an aim to check their suitability for optoelectronic applications. Our results show that all these molecules have excellent π-conjugation throughout.
View Article and Find Full Text PDFTriazenes are a unique class of polyazo compounds containing three consecutive nitrogen atoms in an acyclic arrangement and are promising NLO candidates. In the present work, a series of 15 donor-π-acceptor type vinyl coupled triazene derivatives (VCTDs) with different acceptors (-NO(2), -CN, and -COOH) have been designed, and their structure, nonlinear response, and optoelectronic properties have been studied using density functional theory and time-dependent density functional theory methods. B3LYP/6-311g(d,p) optimized geometries of the designed candidates show delocalization from the acceptor to donor through a π-bridge.
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