Publications by authors named "Ryota Mizushima"

Gas vesicle nanoparticles (GVs) are gas-containing protein assemblies expressed in bacteria and archaea. Recently, GVs have gained considerable attention for biotechnological applications as genetically encodable contrast agents for MRI and ultrasonography. However, at present, the practical use of GVs is hampered by a lack of robust methodology for their induction into mammalian cells.

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Article Synopsis
  • Thalidomide is a teratogen that disrupts fetal development by interacting with cereblon (CRBN), a crucial protein involved in brain development.
  • Research shows that CRBN is vital for the proliferation of neural stem cells (NSCs), and its reduction in zebrafish embryos leads to smaller brains similar to the effects of thalidomide.
  • Increasing CRBN levels results in larger brains by promoting NSC growth and expanding specific brain region gene expressions, highlighting its role in determining brain size.
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MutL is a multi-domain protein comprising an N-terminal ATPase domain (NTD) and C-terminal dimerization domain (CTD), connected with flexible linker regions, that plays a key role in DNA mismatch repair. To expand understanding of the regulation mechanism underlying MutL endonuclease activity, our NMR-based study investigated interactions between the CTD of MutL, derived from the hyperthermophilic bacterium Aquifex aeolicus (aqMutL-CTD), and putative binding molecules. Chemical shift perturbation analysis with the model structure of aqMutL-CTD and circular dichroism results revealed that tight Zn(2+) binding increased thermal stability without changing secondary structures to function at high temperatures.

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