Publications by authors named "Ruud Toonen"

Mutations in the microtubule-binding motor protein kinesin 5 A (KIF5A) are implicated in several adult-onset motor neuron diseases, including Amyotrophic Lateral Sclerosis, Spastic Paraplegia Type 10 and Charcot-Marie-Tooth Disease Type 2. While KIF5 family members transport a variety of cargos along axons, the specific cargos affected by KIF5A mutations remain poorly understood. Here, we generated KIF5Anull mutant human motor neurons and analyzed the impact on axonal transport and motor neuron outgrowth and regeneration in vitro.

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  • Neuropeptides and neurotrophins are released from dense core vesicles (DCVs), and recent research highlights the unique role of the RAB3-RIM1 pathway in DCV exocytosis, differentiating it from the synaptic vesicle (SV) exocytosis mechanism.
  • The study identifies rabphilin-3A (RPH3A) as a negative regulator of DCV exocytosis, where its absence led to a threefold increase in DCV release in RPH3A deficient neurons.
  • RPH3A's role in regulating DCV exocytosis is linked to its interaction with SNAP25; although it is not needed for DCV transport, its binding to SNAP25 is
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Mutations in the microtubule binding motor protein, kinesin family member 5A (KIF5A), cause the fatal motor neuron disease, Amyotrophic Lateral Sclerosis. While KIF5 family members transport a variety of cargos along axons, it is still unclear which cargos are affected by mutations. We generated null mutant human motor neurons to investigate the impact of KIF5A loss on the transport of various cargoes and its effect on motor neuron function at two different timepoints .

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  • * The study introduces a high-throughput assay using a NPY-Nanoluc reporter to measure dense core vesicle (DCV) exocytosis, which aligns well with existing markers and operates effectively in both rodent and human neurons.
  • * This new method shows improved sensitivity for detecting DCV exocytosis compared to traditional single-cell assays, making it valuable for drug screening and understanding mechanisms behind central nervous system disorders.
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Background: Pathogenic variants in STXBP1/MUNC18-1 cause severe encephalopathies that are among the most common in genetic neurodevelopmental disorders. Different molecular disease mechanisms have been proposed, and pathogenicity prediction is limited. In this study, we aimed to define a generalized disease concept for STXBP1-related disorders and improve prediction.

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MUNC18-1 is an essential protein of the regulated secretion machinery. De novo, heterozygous mutations in STXBP1, the human gene encoding this protein, lead to a severe neurodevelopmental disorder. Here, we describe the electrophysiological characteristics of a unique case of STXBP1-related disorder caused by a homozygous mutation (L446F).

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  • The study investigates a neurodevelopmental disorder (-RD) caused by mutations in the MUNC18-1 gene, leading to symptoms like developmental delay and seizures, with varying severity among patients.
  • Using advanced techniques, researchers analyzed neurons derived from patients' stem cells, finding reduced levels of the MUNC18-1 protein, along with dysregulated proteins linked to synapse function and altered neuronal network activity.
  • The findings reveal common cellular traits across patients with -RD while also highlighting distinct phenotypic differences, suggesting varied underlying mechanisms of the disorder that could inform future research and therapy development.
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  • Neuropeptides and neurotrophins, stored in dense core vesicles (DCVs), play a crucial role as chemical signals in the brain, but the factors affecting their fusion and replenishment are not fully understood.
  • Research shows that stimulation patterns, particularly 50-Hz action potential bursts, lead to optimal DCV fusion, with shorter interburst intervals enhancing capacity without increasing total fusion.
  • Different stimulation types, including theta burst and low-frequency stimulation, also affect DCV fusion, with more intense stimulation resulting in longer-lasting fusion events.
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  • * Research using a mouse model lacking tomosyn showed that while the number of DCV fusion events remained unchanged, the levels of important DCV cargos like neuropeptide Y and BDNF were significantly reduced, indicating a key role for tomosyns in DCV biogenesis rather than exocytosis.
  • * The study found that restoring BDNF levels was possible by re-expressing tomosyn, and suggested that tomosyns are essential for packaging secretory cargo
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  • The Golgi apparatus is vital for sorting proteins, especially in neurons, and this study investigates the localization of 21 proteins within it using advanced microscopy techniques.
  • The researchers categorized the proteins based on their positioning relative to a key Golgi marker, TGN38, discovering three distinct groups: upstream, overlapping, and downstream of TGN38.
  • Seven proteins were found to completely overlap with TGN38, while those downstream varied in distance from it, and upstream proteins were located between TGN38 and other Golgi markers, aligning with their known functions.
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Retrograde trafficking towards the trans-Golgi network (TGN) is important for dense core vesicle (DCV) biogenesis. Here, we used Vti1a/b deficient neurons to study the impact of disturbed retrograde trafficking on Golgi organization and cargo sorting. In Vti1a/b deficient neurons, staining intensity of cis-/medial Golgi proteins (e.

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  • - The study examines how different organelles move through neurons in live mice, using advanced imaging techniques to track Neuropeptide Y (NPY), LAMP1, and RAB7 organelles in thalamocortical axons.
  • - Results indicated that LAMP1 and RAB7 organelles move faster than NPY organelles, with NPY showing more selective movement towards synapses and significant slowdowns when reaching them.
  • - The research also found that spontaneous neuronal activity and increased calcium levels enhance organelle transport speeds in the brain, revealing distinct transport dynamics compared to previous lab-based studies.
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  • The study by Orr et al. outlines a molecular process that regulates presynaptic homeostatic plasticity, which helps neurons adjust their activity levels when postsynaptic activity decreases.
  • They identify two major presynaptic signaling complexes that play crucial roles in this process, serving as central hubs for molecular interactions.
  • The research highlights how these signaling pathways enhance presynaptic vesicle fusion, improving communication between neurons under reduced activity conditions.
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  • Induced pluripotent stem cells (iPSCs) are increasingly used for modeling brain disorders, but there's a lack of clarity on the best study designs and statistical analyses.
  • The researchers compared different study designs, generating various types of data from iPSC-derived neurons, and found that many existing studies are underpowered.
  • They discovered that using isogenic iPSC lines offers more statistical power compared to traditional case-control designs and introduced a free online tool to help researchers optimize study designs based on preliminary data.
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  • * In Stxbp1 null mutants, dynamin-1 levels drop significantly, and the transcript levels of its encoding gene, Dnm1, are also reduced by 50%, impacting several other endocytic proteins to a lesser degree.
  • * The study indicates that MUNC18-1 does not directly bind dynamin-1, and reducing dynamin-1 alone doesn’t cause neurodegeneration in Stxbp1 mutants, suggesting that MUNC18-1
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  • The study investigates the neurodevelopmental outcomes in patients with developmental and epileptic encephalopathy (DEE), focusing on the relationship between neurodevelopment and epilepsy.
  • Researchers analyzed clinical data from 48 patients and found that seizure onset age influences developmental progress, with later onset linked to better outcomes, while seizure duration and remission age did not significantly affect development.
  • The results highlight two main disease trajectories—either early seizure remission or drug-resistant epilepsy—suggesting a wide range of neurodevelopmental impacts and the need for more focused future research on DEE.
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  • * Neurons without FBXO41 maintain normal structure but show impaired synaptic transmission, with excitatory neurons releasing fewer synaptic vesicles and inhibitory neurons having decreased functional properties.
  • * During brain development, FBXO41 loss results in reduced size and cellularity in specific brain regions and delays in neuronal migration and activity, indicating its importance in early brain function.
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  • Research found that MUNC18-1 is essential for DCV exocytosis in CNS neurons, while other SM proteins (MUNC18-2 and MUNC18-3) do not support this function.
  • Impaired neuropeptide secretion due to reduced MUNC18-1 expression may contribute to behavioral and developmental issues seen in heterozygous mice, which serve as a model for human STXBP1 syndrome.
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Synaptic vesicles (SVs) release neurotransmitters at specialized active zones, but release sites and organizing principles for the other major secretory pathway, neuropeptide/neuromodulator release from dense-core vesicles (DCVs), remain elusive. We identify dynamins, yeast Vps1 orthologs, as DCV fusion site organizers in mammalian neurons. Genetic or pharmacological inactivation of all three dynamins strongly impaired DCV exocytosis, while SV exocytosis remained unaffected.

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Neuropeptides and neurotrophic factors secreted from dense core vesicles (DCVs) control many brain functions, but the calcium sensors that trigger their secretion remain unknown. Here, we show that in mouse hippocampal neurons, DCV fusion is strongly and equally reduced in synaptotagmin-1 (Syt1)- or Syt7-deficient neurons, but combined Syt1/Syt7 deficiency did not reduce fusion further. Cross-rescue, expression of Syt1 in Syt7-deficient neurons, or vice versa, completely restored fusion.

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Neuropeptides are essential signaling molecules secreted by dense-core vesicles (DCVs). They contribute to information processing in the brain, controlling a variety of physiological conditions. Defective neuropeptide signaling is implicated in several psychiatric disorders.

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Loss of the exocytic Sec1/MUNC18 protein MUNC18-1 or its target-SNARE partners SNAP25 and syntaxin-1 results in rapid, cell-autonomous and unexplained neurodegeneration, which is independent of their known role in synaptic vesicle exocytosis. cis-Golgi abnormalities are the earliest cellular phenotypes before degeneration occurs. Here, we investigated whether loss of MUNC18-1 causes defects in intracellular membrane transport pathways in primary murine neurons that may explain neurodegeneration.

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Ca2+/calmodulin-dependent kinase II (CaMKII) regulates synaptic plasticity in multiple ways, supposedly including the secretion of neuromodulators like brain-derived neurotrophic factor (BDNF). Here, we show that neuromodulator secretion is indeed reduced in mouse α- and βCaMKII-deficient (αβCaMKII double-knockout [DKO]) hippocampal neurons. However, this was not due to reduced secretion efficiency or neuromodulator vesicle transport but to 40% reduced neuromodulator levels at synapses and 50% reduced delivery of new neuromodulator vesicles to axons.

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The SNARE proteins involved in the secretion of neuromodulators from dense core vesicles (DCVs) in mammalian neurons are still poorly characterized. Here we use tetanus neurotoxin (TeNT) light chain, which cleaves VAMP1, 2 and 3, to study DCV fusion in hippocampal neurons and compare the effects on DCV fusion to those on synaptic vesicle (SV) fusion. Both DCV and SV fusion were abolished upon TeNT expression.

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Heterozygous mutations in the STXBP1 gene encoding the presynaptic protein MUNC18-1 cause STXBP1 encephalopathy, characterized by developmental delay, intellectual disability and epilepsy. Impaired mutant protein stability leading to reduced synaptic transmission is considered the main underlying pathogenetic mechanism. Here, we report the first two cases carrying a homozygous STXBP1 mutation, where their heterozygous siblings and mother are asymptomatic.

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