Publications by authors named "Runjia Ji"

Article Synopsis
  • The text discusses the unique process of magnetosome formation in magnetotactic bacteria (MTB), showcasing it as a significant microbial-controlled biomineralization example.
  • It emphasizes the importance of studying MTB to comprehend magnetoreception, bacterial organelles, and to explore potential applications in biotechnology and medicine.
  • The review highlights recent discoveries about MTB diversity and provides insights into magnetosome biosynthesis, along with the increasing biomedical and biotechnological uses of these microorganisms.
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Background: Magnetotactic bacteria (MTB) are a unique group of microorganisms that sense and navigate through the geomagnetic field by biomineralizing magnetic nanoparticles. MTB from the phylum Nitrospirota (previously known as Nitrospirae) thrive in diverse aquatic ecosystems. They are of great interest due to their production of hundreds of magnetite (FeO) magnetosome nanoparticles per cell, which far exceeds that of other MTB.

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Magnetosome gene clusters (MGCs), which are responsible for magnetosome biosynthesis and organization in magnetotactic bacteria (MTB), are the key to deciphering the mechanisms and evolutionary origin of magnetoreception, organelle biogenesis, and intracellular biomineralization in bacteria. Here, we report the development of MagCluster, a Python stand-alone tool for efficient exploration of MGCs from large-scale (meta)genomic data.

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Magnetotactic bacteria represent a valuable model system for the study of microbial biomineralization and magnetotaxis. Here, we report two metagenome-assembled genome sequences of uncultivated magnetotactic bacteria belonging to the order These genomes contain nearly complete magnetosome gene clusters responsible for magnetosome biomineralization.

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