We theoretically study the conformational and dynamical properties of semiflexible active polar ring polymers under linear shear flow. A ring is described as a continuous semiflexible Gaussian polymer with a tangential active force of a constant density along its contour. The linear but non-Hermitian equation of motion is solved using an eigenfunction expansion, which yields activity-independent, but shear-rate-dependent, relaxation times and activity-dependent frequencies.
View Article and Find Full Text PDFWe present Brownian dynamics simulation results of a flexible linear polymer with excluded-volume interactions under shear flow in the presence of active noise. The active noise strongly affects the polymer's conformational and dynamical properties, such as the stretching in the flow direction and compression in the gradient direction, shear-induced alignment, and shear viscosity. In the asymptotic limit of large activities and shear rates, the power-law scaling exponents of these quantities differ significantly from those of passive polymers.
View Article and Find Full Text PDFDiagnostics (Basel)
December 2022
(1) Background: Millions of people worldwide were infected with COVID-19. After the acute phase of the disease, many suffer from prolonged symptoms, the post-COVID syndrome, especially the phenotype with lung residuals. Many open questions regarding lung ultrasound (LUS) have to be answered.
View Article and Find Full Text PDFThe conformational and dynamical properties of isolated flexible active polar linear polymers (APLPs) are studied analytically. The APLPs are modeled as Gaussian bead-spring linear chains augmented by tangential active forces, both in a discrete and continuous representation. The polar forces lead to linear non-Hermitian equations of motion, which are solved by an eigenfunction expansion in terms of a biorthogonal basis set.
View Article and Find Full Text PDFSystems comprised of self-steering active Brownian particles are studied simulations for a minimal cognitive flocking model. The dynamics of the active Brownian particles is extended by an orientational response with limited maneuverability to an instantaneous visual input of the positions of neighbors within a vision cone and a cut-off radius. The system exhibits large-scale self-organized structures, which depend on selected parameter values, and, in particular, the presence of excluded-volume interactions.
View Article and Find Full Text PDFLung ultrasound has the potential to enable standardized follow-up without radiation exposure and with lower associated costs in comparison to CT scans. It is a valuable tool to follow up on patients after a COVID-19 infection and evaluate if there is pulmonary fibrosis developing. Echocardiography, including strain imaging, is a proven tool to assess various causes of dyspnea and adds valuable information in the context of long COVID care.
View Article and Find Full Text PDFThe conformational and dynamical properties of isolated semiflexible active polar ring polymers are investigated analytically. A ring is modeled as a continuous Gaussian polymer exposed to tangential active forces. The analytical solution of the linear non-Hermitian equation of motion in terms of an eigenfunction expansion shows that ring conformations are independent of activity.
View Article and Find Full Text PDFThe properties of microswimmer dumbbells composed of pusher-puller pairs are investigated by mesoscale hydrodynamic simulations employing the multiparticle collision dynamics approach for the fluid. An individual microswimmer is represented by a squirmer, and various active-stress combinations in a dumbbell are considered. The squirmers are connected by a bond, which does not impose any geometrical restriction on the individual rotational motion.
View Article and Find Full Text PDFThe conformational and dynamical properties of active Brownian polymers embedded in a fluid depend on the nature of the driving mechanism, e.g., self-propulsion or external actuation of the monomers.
View Article and Find Full Text PDFSemiflexible polymers comprised of active Brownian particles (ABPOs) exhibit intriguing activity-driven conformational and dynamical features. Analytically, the generic properties of ABPOs can be obtained in a mean-field description applying the Gaussian semiflexible polymer model. In this article, we derive a path integral representation of the stationary-state distribution function of such ABPOs, based on the stationary-state distribution function of the normal mode amplitudes following from the Langevin equation of motion.
View Article and Find Full Text PDFWe present a multiparticle collision dynamics (MPC) implementation of layered immiscible fluids A and B of different shear viscosities separated by planar interfaces. The simulated flow profile for imposed steady shear motion and the time-dependent shear stress functions are in excellent agreement with our continuum hydrodynamics results for the composite fluid. The wave-vector dependent transverse velocity auto-correlation functions (TVAF) in the bulk-fluid regions of the layers decay exponentially, and agree with those of single-phase isotropic MPC fluids.
View Article and Find Full Text PDFThe conformational and dynamical properties of a passive polymer embedded in a bath of active Brownian particles (ABPs) are studied by Langevin dynamics simulations. Various activities and ABP concentrations below and above the critical values for motility-induced phase separation (MIPS) are considered. In a homogeneous ABP fluid, the embedded polymer swells with increasing bath activity, with stronger swelling for larger densities.
View Article and Find Full Text PDFThe properties of semiflexible polymers tethered by one end to an impenetrable wall and exposed to oscillatory shear flow are investigated by mesoscale simulations. A polymer, confined in two dimensions, is described by a linear bead-spring chain, and fluid interactions are incorporated by the Brownian multiparticle collision dynamics approach. At small strain, the polymers follow the applied flow field.
View Article and Find Full Text PDFObjectives: Only a small proportion of lung transplant recipients achieve a physical status comparable to healthy individuals in the long term. It is reasonable to hypothesize that the necessary cardiopulmonary adaptation required for strenuous physical exercise may be impaired. Exposure to high altitude provides an optimal platform to study the physiological cardiopulmonary adaptation in lung transplant recipients under aerobic conditions.
View Article and Find Full Text PDFEur Phys J E Soft Matter
March 2021
The surface distribution of flagella in peritrichous bacterial cells has been traditionally assumed to be random. Recently, the presence of a regular grid-like pattern of basal bodies has been suggested. Experimentally, the manipulation of the anchoring points of flagella in the cell membrane is difficult, and thus, elucidation of the consequences of a particular pattern on bacterial locomotion is challenging.
View Article and Find Full Text PDFCorrection for 'Hydrodynamic interactions in squirmer dumbbells: active stress-induced alignment and locomotion' by Judit Clopés et al., Soft Matter, 2020, 16, 10676-10687, DOI: .
View Article and Find Full Text PDFHydrodynamic interactions are fundamental for the dynamics of swimming self-propelled particles. Specifically, bonds between microswimmers enforce permanent spatial proximity and, thus, enhance emergent correlations by microswimmer-specific flow fields. We employ the squirmer model to study the swimming behavior of microswimmer dumbbells by mesoscale hydrodynamic simulations, where the squirmers' rotational motion is geometrically unrestricted.
View Article and Find Full Text PDFAdding shape and interaction anisotropy to a colloidal particle offers exquisitely tunable routes to engineer a rich assortment of complex-architected structures. Inspired by the hierarchical self-assembly concept with block copolymers and DNA liquid crystals and exploiting the unique assembly properties of DNA, we report here the construction and self-assembly of DNA-based soft-patchy anisotropic particles with a high degree of modularity in the system's design. By programmable positioning of thermoresponsive polymeric patches on the backbone of a stiff DNA duplex with linear and star-shaped architecture, we reversibly drive the DNA from a disordered ensemble to a diverse array of long-range ordered multidimensional nanostructures with tunable lattice spacing, ranging from lamellar to bicontinuous double-gyroid and double-diamond cubic morphologies, through the alteration of temperature.
View Article and Find Full Text PDFActive matter agents consume internal energy or extract energy from the environment for locomotion and force generation. Already, rather generic models, such as ensembles of active Brownian particles, exhibit phenomena, which are absent at equilibrium, particularly motility-induced phase separation and collective motion. Further intriguing nonequilibrium effects emerge in assemblies of bound active agents as in linear polymers or filaments.
View Article and Find Full Text PDFThe conformational and dynamical properties of active polymers in solution are determined by the nature of the activity. Here, the behavior of polymers with self-propelled, active Brownian particle-type monomers differs qualitatively from that of polymers with monomers driven externally by colored-noise forces. We present simulation and theoretical results for polymers in solution in the presence of external active noise.
View Article and Find Full Text PDFMicroswimmers such as E. coli bacteria accumulate and exhibit an intriguing dynamics near walls, governed by hydrodynamic and steric interactions. Insight into the underlying mechanisms and predominant interactions demand a detailed characterization of the entrapment process.
View Article and Find Full Text PDFEnsembles of actuated colloids are excellent model systems to explore emergent out-of-equilibrium structures, complex collective dynamics, and design rules for the next generation materials. Here, we demonstrate that ferromagnetic microparticles suspended at an air-water interface and energized by an external rotating magnetic field spontaneously form dynamic ensembles of synchronized spinners in a certain range of the excitation field parameters. Each spinner generates strong hydrodynamic flows, and collective interactions of the multiple spinners promote a formation of dynamic lattices.
View Article and Find Full Text PDFThe rotational diffusive motion of a self-propelled, attractive spherical colloid immersed in a solution of self-avoiding polymers is studied by mesoscale hydrodynamic simulations. A drastic enhancement of the rotational diffusion by more than an order of magnitude in the presence of activity is obtained. The amplification is a consequence of two effects, a decrease of the amount of adsorbed polymers by active motion and an asymmetric encounter with polymers on the squirmer surface, which yields an additional torque and random noise for the rotational motion.
View Article and Find Full Text PDFActivity and autonomous motion are fundamental in living and engineering systems. This has stimulated the new field of 'active matter' in recent years, which focuses on the physical aspects of propulsion mechanisms, and on motility-induced emergent collective behavior of a larger number of identical agents. The scale of agents ranges from nanomotors and microswimmers, to cells, fish, birds, and people.
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