The local-global relationship of nature.

In the light of possible advance in the elucidation of emergence in natural systems we address the likelihood of an overriding relationship between the local and the global in Nature. We consider the possible views of an abstract conglomeration of entities, and whether a global representation can be established. This leads to a consideration of the problem in natural contexts to establish a relationship between local and global properties.

An approach to the plant body: Assessing concrete and abstract aspects.

The paper aims at proposing a representation of plants as individuals. The first section selects the population of plants to which this study is addressed. The second section describes the effective architecture of plants as modular systems with fixed and mobile elements, in other words, plants and their extensions.

An extended framework for science.

We may be at the cusp of a next generation framework for science which can be facilitated by understanding current limitations in the context of a divergence of 'scientific' tradition from the Axial Age (800-200 BCE) to the present. A powerful advance may come from fusing certain elements from Western and Eastern traditions, synthesizing the framework with an apt understanding of the divergence. Key traits will include the ethopoetic nature of the scientist with attention to his/her experience of self.

The living organism: Strengthening the basis.

In spite of the considerable amount of literature dedicated to the living organism, it retains its mysteries. One of the most discussed aspects nowadays is whether the term "cognition" can be attributed to all classes of organisms, or whether it only refers to a metaphoric use of one human reality. Our approach consists of retaining the term "cognition" and making it a technical term, in order to propose a generic model.

From creativity to perception: The conditions of possibility for a true biology.

The phenomenologist Renaud Barbaras defends an alternative conception of life against the well-known proposals that view life as self-preserving or seeking to replicate its own means of replication in the form of repetition instead of creation or accomplishment as Barbaras proposes. Indeed, he criticizes the reductive nature of scientific inquiry which tries to define life solely on the basis of the internal constraints, which leads to an impossible true biology. Barbaras' conception is rooted in Husserl and Merleau-Ponty who conceives perception as a subjective act by which the subject enters a relationship with the world.

The organism and its double: an approach to the individual.

The individual is certainly the most complex entity that we know until now. Current research converges on a triad-like understanding of the biological individual as an interface of a mechanism and an ecosystem. The present article wants to propose a more generic concept of individual by integrating the functional role of its qualitative characteristics.

Plastid thioredoxins f and m are related to the developing and salinity response of post-germinating seeds of Pisum sativum.

Plastid thioredoxins (TRXs) f and m have long been considered to regulate almost exclusively photosynthesis-related processes. Nonetheless, some years ago, we found that type-f and m TRXs were also present in non-photosynthetic organs such as roots and flowers of adult pea plants. In the present work, using pea seedlings 2-5 days old, we have determined the mRNA expression profile of the plastid PsTRX f, m1, and m2, together with the ferredoxin NADP reductase (FNR).

Circadian regulation of chloroplastic f and m thioredoxins through control of the CCA1 transcription factor.

Chloroplastic thioredoxins f and m (TRX f and TRX m) mediate light regulation of carbon metabolism through the activation of Calvin cycle enzymes. The role of TRX f and m in the activation of Calvin cycle enzymes is best known among the TRX family. However, the discoveries of new potential targets extend the functions of chloroplastic TRXs to other processes in non-photosynthetic tissues.

An antioxidant redox system in the nucleus of wheat seed cells suffering oxidative stress.

Cereal seed cells contain different mechanisms for protection against the oxidative stress that occurs during maturation and germination. One such mechanism is based on the antioxidant activity of a 1-Cys peroxiredoxin (1-Cys Prx) localized in the nuclei of aleurone and scutellum cells. However, nothing is known about the mechanism of activation of this enzyme.

Immunocytochemical localization of Pisum sativum TRXs f and m in non-photosynthetic tissues.

Plants are the organisms containing the most complex multigenic family for thioredoxins (TRX). Several types of TRXs are targeted to chloroplasts, which have been classified into four subgroups: m, f, x, and y. Among them, TRXs f and m were the first plastidial TRXs characterized, and their function as redox modulators of enzymes involved in carbon assimilation in the chloroplast has been well-established.

PsTRXh1 and PsTRXh2 are both pea h-type thioredoxins with antagonistic behavior in redox imbalances.

Thioredoxins (TRXs) are small ubiquitous oxidoreductases involved in disulfide bond reduction of a large panel of target proteins. The most complex cluster in the family of plant TRXs is formed by h-type TRXs. In Arabidopsis (Arabidopsis thaliana), nine members of this subgroup were described, which are less well known than their plastidial counterparts.

Cloning and characterization of three thioredoxin h isoforms from wheat showing differential expression in seeds.

Plants contain several genes encoding thioredoxin h. In cereals, type-h thioredoxins are abundant in developing and germinating grains, but the mechanism regulating the expression of these genes and their specific function is poorly known. The cloning of three full-length cDNAs encoding thioredoxin h, stated Trxh1, Trxh2 and Trxh3, from wheat (Triticum aestivum cv.

Homology modeling and molecular dynamics simulations of the N-terminal domain of wheat high molecular weight glutenin subunit 10.

High molecular weight glutenin subunits (HMW-GS) are of a particular interest because of their biomechanical properties, which are important in many food systems such as breadmaking. Using fold-recognition techniques, we identified a fold compatible with the N-terminal domain of HMW-GS Dy10. This fold corresponds to the one adopted by proteins belonging to the cereal inhibitor family.