Publications by authors named "Rohit K Jangra"

Multiple viruses that are highly pathogenic in humans are known to have evolved in bats. How bats tolerate infection with these viruses, however, is poorly understood. As viruses engage in a wide range of interactions with their hosts, it is essential to study bat viruses in a system that resembles their natural environment like bat-derived cellular models.

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  • Understanding bat coronaviruses (CoVs) is vital for preventing future pandemics, so researchers created modified viruses to study how these bat CoVs enter cells.
  • They discovered a surprising change in a specific region of the virus that improved its ability to bind to a human receptor, enhancing its entry into cells.
  • The study reveals how bat CoVs might adapt to jump between species and suggests strategies to target vulnerabilities in these viruses for potential prevention measures.
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Understanding the zoonotic risks posed by bat coronaviruses (CoVs) is critical for pandemic preparedness. Herein, we generated recombinant vesicular stomatitis viruses (rVSVs) bearing spikes from divergent bat CoVs to investigate their cell entry mechanisms. Unexpectedly, the successful recovery of rVSVs bearing the spike from SHC014, a SARS-like bat CoV, was associated with the acquisition of a novel substitution in the S2 fusion peptide-proximal region (FPPR).

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SARS-CoV-2 infection remains a global burden. Despite intensive research, the mechanism and dynamics of early viral replication are not completely understood, such as the kinetics of the formation of genomic RNA (gRNA), sub-genomic RNA (sgRNA), and replication centers/organelles (ROs). We employed single-molecule RNA-fluorescence in situ hybridization (smRNA-FISH) to simultaneously detect viral gRNA and sgRNA and immunofluorescence to detect nsp3 protein, a marker for the formation of RO, and carried out a time-course analysis.

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Ever-evolving SARS-CoV-2 variants of concern (VOCs) have diminished the effectiveness of therapeutic antibodies and vaccines. Developing a coronavirus vaccine that offers a greater breadth of protection against current and future VOCs would eliminate the need to reformulate COVID-19 vaccines. Here, we rationally engineer the sequence-conserved S2 subunit of the SARS-CoV-2 spike protein and characterize the resulting S2-only antigens.

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Rubella virus (RuV) is an enveloped plus-sense RNA virus and a member of the genus. RuV infection in pregnant women can lead to miscarriage or an array of severe birth defects known as congenital rubella syndrome. Novel rubiviruses were recently discovered in various mammals, highlighting the spillover potential of other rubiviruses to humans.

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  • Scientists are studying two viruses, Andes virus (ANDV) and Sin Nombre virus (SNV), which can cause serious illness in people but don't have any approved treatments yet.
  • They found that a protein called Protocadherin-1 (PCDH1) is important for these viruses to enter human cells, meaning it could be a target for new medicines.
  • By changing one tiny part of this protein, researchers were able to protect hamsters from getting sick, suggesting that modifying PCDH1 might help create ways to fight these viruses.
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  • Emerging hantaviruses are dangerous to humans, causing severe diseases with no current vaccines or treatments.
  • Researchers isolated a monoclonal antibody that targets the viral fusion complex, explaining its broad neutralizing capability against hantaviruses.
  • An engineered variant of this antibody shows improved effectiveness against the dangerous Andes virus, positioning it as a promising candidate for a universal hantavirus treatment.
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Herpes simplex virus (HSV) receptor engagement activates phospholipid scramblase triggering Akt translocation to the outer leaflet of the plasma membrane where its subsequent phosphorylation promotes viral entry. We hypothesize that this previously unrecognized outside-inside signaling pathway is employed by other viruses and that cell-impermeable kinase inhibitors could provide novel antivirals. We synthesized a cell-impermeable analog of staurosporine, CIMSS, which inhibited outer membrane HSV-induced Akt phosphorylation and blocked viral entry without inducing apoptosis.

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  • - The Bronx was a major hotspot for COVID-19 in the U.S., and researchers studied 104 SARS-CoV-2 genomes from March to October 2020 to track how the virus evolved there.
  • - The genomic diversity of the virus in the Bronx reflected trends seen in New York City and the state, but researchers noted changes in mutation prevalence over time.
  • - By analyzing the genomic data, they were able to differentiate between reinfections and ongoing infections in two children, suggesting that targeted genomic monitoring can aid in COVID-19 management.
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Background: A major challenge of the SARS-CoV-2 pandemic is to better define "protective thresholds" to guide the global response. We aimed to characterize the longitudinal dynamics of the antibody responses in naturally infected individuals in Chile and compared them to humoral responses induced after immunization with CoronaVac-based on an inactivated whole virus -or the BNT162b2- based on mRNA-vaccines. We also contrasted them with the respective effectiveness and efficacy data available for both vaccines.

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  • The hantavirus Puumala virus (PUUV) and related viruses lead to serious diseases in humans, but there are currently no FDA-approved treatments available.
  • Recent research has identified human neutralizing antibodies (nAbs) that target specific glycoprotein spikes of the virus, which may help in treating these infections.
  • One particularly promising nAb, ADI-42898, has shown the ability to block virus entry and provide protection in animal models, making it a strong candidate for future clinical use and vaccine development.
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  • Cholesterol homeostasis is essential for the replication of various viruses, including Ebola, hepatitis C, and HIV, with NPC1 playing a key role in cholesterol trafficking within cells.
  • Research identified NPC1 as a crucial factor for the infection of mammalian orthoreovirus, where its absence significantly impairs the virus's ability to replicate in the cell cytoplasm.
  • The study demonstrates that while NPC1 is not needed for initial viral entry or uncoating, it is vital for delivering active viral core particles from endosomes to the cytoplasm, highlighting the importance of cholesterol transport in viral infections.
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The clinical outcome of SARS-CoV-2 infection varies widely between individuals. Machine learning models can support decision making in healthcare by assessing fatality risk in patients that do not yet show severe signs of COVID-19. Most predictive models rely on static demographic features and clinical values obtained upon hospitalization.

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Transfer of convalescent plasma (CP) had been proposed early during the SARS-CoV-2 pandemic as an accessible therapy, yet trial results worldwide have been mixed, potentially due to the heterogeneous nature of CP. Here we perform deep profiling of SARS-CoV-2-specific antibody titer, Fc-receptor binding, and Fc-mediated functional assays in CP units, as well as in plasma from hospitalized COVID-19 patients before and after CP administration. The profiling results show that, although all recipients exhibit expanded SARS-CoV-2-specific humoral immune responses, CP units contain more functional antibodies than recipient plasma.

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Multiple agents in the family (filoviruses) are associated with sporadic human outbreaks of highly lethal disease, while others, including several recently identified agents, possess strong zoonotic potential. Although viral glycoprotein (GP)-specific monoclonal antibodies have demonstrated therapeutic utility against filovirus disease, currently FDA-approved molecules lack antiviral breadth. The development of broadly neutralizing antibodies has been challenged by the high sequence divergence among filovirus GPs and the complex GP proteolytic cleavage cascade that accompanies filovirus entry.

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Most known SARS-CoV-2 neutralizing antibodies (nAbs), including those approved by the FDA for emergency use, inhibit viral infection by targeting the receptor-binding domain (RBD) of the spike (S) protein. Variants of concern (VOC) carrying mutations in the RBD or other regions of S reduce the effectiveness of many nAbs and vaccines by evading neutralization. Therefore, therapies that are less susceptible to resistance are urgently needed.

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Arthritogenic alphaviruses are globally distributed, mosquito-transmitted viruses that cause rheumatological disease in humans and include Chikungunya virus (CHIKV), Mayaro virus (MAYV), and others. Although serological evidence suggests that some antibody-mediated heterologous immunity may be afforded by alphavirus infection, the extent to which broadly neutralizing antibodies that protect against multiple arthritogenic alphaviruses are elicited during natural infection remains unknown. Here, we describe the isolation and characterization of MAYV-reactive alphavirus monoclonal antibodies (mAbs) from a CHIKV-convalescent donor.

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Objective: Human hantavirus infections can cause haemorrhagic fever with renal syndrome (HFRS). The pathogenic mechanisms are not fully understood, nor if they affect the humoral immune system. The objective of this study was to investigate humoral immune responses to hantavirus infection and to correlate them to the typical features of HFRS: thrombocytopenia and transient kidney dysfunction.

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  • * Previous beliefs suggested that specific integrins (β3 and β1) and decay-accelerating factor (DAF) were key to hantavirus entry, but solid evidence for this was lacking.
  • * Using CRISPR/Cas9 technology, researchers found that while knocking out traditional receptors had minimal impact, the loss of protocadherin-1 significantly decreased hantavirus entry, indicating that other crucial receptors for these viruses are yet to be identified.
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  • Patients previously infected with SARS-CoV-2 develop strong neutralizing antibody (nAb) responses, peaking around 3-4 weeks after symptom onset, and these responses can last for up to 12 months.
  • Vaccination can significantly boost nAb levels in individuals who were previously infected, with two doses of CoronaVac or one dose of BNT162b2 strengthening the immune response, although some groups, like obese individuals, may not respond as well.
  • Naïve individuals receiving the same vaccine doses achieve nAb levels comparable to those of recovered patients months after natural infection, highlighting the need for two doses of CoronaVac for effective immunity in both groups.
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