Estimation of genotyping error rate from repeat genotyping, unintentional recaptures and known parent-offspring comparisons in 16 microsatellite loci for brown rockfish (Sebastes auriculatus).

Genotyping errors are present in almost all genetic data and can affect biological conclusions of a study, particularly for studies based on individual identification and parentage. Many statistical approaches can incorporate genotyping errors, but usually need accurate estimates of error rates. Here, we used a new microsatellite data set developed for brown rockfish (Sebastes auriculatus) to estimate genotyping error using three approaches: (i) repeat genotyping 5% of samples, (ii) comparing unintentionally recaptured individuals and (iii) Mendelian inheritance error checking for known parent-offspring pairs.

Low density lipoprotein cholesterol is inversely correlated with abdominal visceral fat area: a magnetic resonance imaging study.

Background: Visceral Fat Area (VFA) is an independent predictor of coronary disease. While low density lipoprotein cholesterol (LDL-C) is used to determine risk and guide therapy, its accuracy fails in obese patients who may have low LDL-C despite high VFA.

Objective: We sought to describe the relationship between VFA, LDL-C and to describe shifting cholesterol metabolism with increasing VFA.

Liver fat percent is associated with metabolic risk factors and the metabolic syndrome in a high-risk vascular cohort.

Objective: To determine whether liver fat percent (LFP) is associated with the metabolic syndrome independently of visceral fat area (VFA).

Methods: 43 High-risk vascular patients not on lipid-lowering therapy were evaluated for the Adult Treatment Panel III (ATPIII) metabolic syndrome criteria and underwent magnetic resonance imaging (MRI) to quantify VFA and subcutaneous fat area (SFA) at the L4-L5 disc and liver magnetic resonance spectroscopy (MRS) to quantify LFP. Comparisons: 1.

Reef fish diversity at Aldabra Atoll, Seychelles, during the five years following the 1998 coral bleaching event.

Quantitative surveys of fish-species diversity were undertaken at 10 m and 20 m water depth on the outer reef at Aldabra Atoll, southern Seychelles, between November 1999 and May 2003. No significant changes in total fish-species diversity, numbers of families represented by these species, or numbers of pomacentrid or chaetodontid species were seen, contrary to fish-diversity changes seen on coral bleaching-impacted reefs elsewhere. The lack of additional anthropogenic pressures at remote Aldabara may make this system, and others like it, more tolerant of bleaching-related population changes.

Coral recovery at Aldabra Atoll, Seychelles: five years after the 1998 bleaching event.

Changes in reef benthos were assessed at Aldabra Atoll following the mass coral bleaching event of 1998. Video transects were used to survey the benthos and analysed using the Australian Institute of Marine Science five-dot method. Comparison of coral cover data collected by the Cambridge Southern Seychelles Atoll Research Programme with data collected during this study revealed that mortality of coral at Aldabra following the bleaching event was approximately 66% at 10 m depth and 38% at 20 m depth.