Is the long-tailed macaque at risk of extinction?

We review the evidence that long-tailed macaques are at risk of extinction and find that papers supporting this argument present no data supporting a hypothesized decline in abundance. These papers contain numerous misrepresentations of the published literature. Long-tailed macaques thrive in human-altered habitats, are listed by the International Union for the Conservation of Nature as an invasive species of concern, and have shown the ability to increase by 7%-10% per year from low numbers, making the probability of extinction very low.

Fished or farmed: Life cycle impacts of salmon consumer decisions and opportunities for reducing impacts.

Salmon is a nutritious and popular food among consumers predominantly in wealthy countries around the world. Since the mid-1990s farmed salmon production has exceeded wild salmon harvest, and is now 80 % of total global salmon supply. The environmental impacts of farmed salmon are frequently discussed and consumers are faced with a multitude of choices even after deciding to have salmon for dinner: species, production method, origin, product form.

Trade-offs between bycatch and target catches in static versus dynamic fishery closures.

While there have been recent improvements in reducing bycatch in many fisheries, bycatch remains a threat for numerous species around the globe. Static spatial and temporal closures are used in many places as a tool to reduce bycatch. However, their effectiveness in achieving this goal is uncertain, particularly for highly mobile species.

Trawl impacts on the relative status of biotic communities of seabed sedimentary habitats in 24 regions worldwide.

Bottom trawling is widespread globally and impacts seabed habitats. However, risks from trawling remain unquantified at large scales in most regions. We address these issues by synthesizing evidence on the impacts of different trawl-gear types, seabed recovery rates, and spatial distributions of trawling intensity in a quantitative indicator of biotic status (relative amount of pretrawling biota) for sedimentary habitats, where most bottom-trawling occurs, in 24 regions worldwide.

Assessing the population-level conservation effects of marine protected areas.

Marine protected areas (MPAs) cover 3-7% of the world's ocean, and international organizations call for 30% coverage by 2030. Although numerous studies show that MPAs produce conservation benefits inside their borders, many MPAs are also justified on the grounds that they confer conservation benefits to the connected populations that span beyond their borders. A network of MPAs covering roughly 20% of the Channel Islands National Marine Sanctuary was established in 2003, with a goal of providing regional conservation and fishery benefits.

Evaluating impacts of forage fish abundance on marine predators.

Forage fish-small, low trophic level, pelagic fish such as herrings, sardines, and anchovies-are important prey species in marine ecosystems and also support large commercial fisheries. In many parts of the world, forage fish fisheries are managed using precautionary principles that target catch limits below the maximum sustainable yield. However, there are increasing calls to further limit forage fish catch to safeguard their fish, seabird, and marine mammal predators.

Who's onboard? A predictive analysis of cooperative formation in commercial fisheries.

Fishing cooperatives around the world have increasingly taken on co-management of commercial fisheries in recent decades, with generally positive results in meeting management targets and increasing economic value. To better understand which commercial fisheries or fleets are likely to form cooperative associations in the future, we utilized a database of management and fleet-level attributes for 106 fisheries-mainly industrial fisheries from the United States, New Zealand, Canada, and the United Kingdom-to develop a predictive model. We considered two alternative definitions of cooperatives: a legal, operational definition that classified 51 of the fisheries as cooperatives, and a more stringent proactive definition that classified 35 of the fisheries as cooperatives.

Power of a dual-use SNP panel for pedigree reconstruction and population assignment.

The use of high-throughput, low-density sequencing approaches has dramatically increased in recent years in studies of eco-evolutionary processes in wild populations and domestication in commercial aquaculture. Most of these studies focus on identifying panels of SNP loci for a single downstream application, whereas there have been few studies examining the trade-offs for selecting panels of markers for use in multiple applications. Here, we detail the use of a bioinformatic workflow for the development of a dual-purpose SNP panel for parentage and population assignment, which included identifying putative SNP loci, filtering for the most informative loci for the two tasks, designing effective multiplex PCR primers, optimizing the SNP panel for performance, and performing quality control steps for downstream applications.

Effective fisheries management instrumental in improving fish stock status.

Marine fish stocks are an important part of the world food system and are particularly important for many of the poorest people of the world. Most existing analyses suggest overfishing is increasing, and there is widespread concern that fish stocks are decreasing throughout most of the world. We assembled trends in abundance and harvest rate of stocks that are scientifically assessed, constituting half of the reported global marine fish catch.

Managing salmon for wildlife: Do fisheries limit salmon consumption by bears in small Alaskan streams?

Ecosystem-based management requires consideration of overlapping resource use between humans and other consumers. Pacific salmon are an important resource for both fisheries and populations of wildlife around the Pacific rim, including coastal brown bears (Ursus arctos); salmon consumption has been positively linked to bear density, body size, and reproductive rate. As a case study within the broader context of human-wildlife competition for food, we used 16-22 yr of empirical data in four different salmon-bearing systems in southwestern Alaska to explore the relationship between sockeye salmon (Oncorhynchus nerka) availability and consumption by bears.

Correction: Eco-Label Conveys Reliable Information on Fish Stock Health to Seafood Consumers.

[This corrects the article DOI: 10.1371/journal.pone.

Correction: Effects of Management Tactics on Meeting Conservation Objectives for Western North American Groundfish Fisheries.

[This corrects the article DOI: 10.1371/journal.pone.

Bottom trawl fishing footprints on the world's continental shelves.

Bottom trawlers land around 19 million tons of fish and invertebrates annually, almost one-quarter of wild marine landings. The extent of bottom trawling footprint (seabed area trawled at least once in a specified region and time period) is often contested but poorly described. We quantify footprints using high-resolution satellite vessel monitoring system (VMS) and logbook data on 24 continental shelves and slopes to 1,000-m depth over at least 2 years.

Are fishery management upgrades worth the cost?

Many analyses of fishery recovery have demonstrated the potential biological and economic benefits of management reform, but few have compared these to the associated costs of management upgrades, which can be substantial. This study aims to determine if the projected economic benefits of management reform outweigh the increases in management costs required to achieve those benefits. To answer this question, we developed a database of country-level fisheries management costs and use those to estimate the country-level costs of management changes.

Ecosystem-based fisheries management: Perception on definitions, implementations, and aspirations.

Ecosystem-based fisheries management (EBFM) was developed to move beyond single species management by incorporating ecosystem considerations for the sustainable utilization of marine resources. Due to the wide range of fishery characteristics, including different goals of fisheries management across regions and species, theoretical best practices for EBFM vary greatly. Here we highlight the lack of consensus in the interpretation of EBFM amongst professionals in marine science and its implementation.

Supply and demand drive a critical transition to dysfunctional fisheries.

There is growing awareness of the need for fishery management policies that are robust to changing environmental, social, and economic pressures. Here we use conventional bioeconomic theory to demonstrate that inherent biological constraints combined with nonlinear supply-demand relationships can generate threshold effects due to harvesting. As a result, increases in overall demand due to human population growth or improvement in real income would be expected to induce critical transitions from high-yield/low-price fisheries to low-yield/high-price fisheries, generating severe strains on social and economic systems as well as compromising resource conservation goals.

Global analysis of depletion and recovery of seabed biota after bottom trawling disturbance.

Bottom trawling is the most widespread human activity affecting seabed habitats. Here, we collate all available data for experimental and comparative studies of trawling impacts on whole communities of seabed macroinvertebrates on sedimentary habitats and develop widely applicable methods to estimate depletion and recovery rates of biota after trawling. Depletion of biota and trawl penetration into the seabed are highly correlated.

Modeling the impacts of two age-related portfolio effects on recruitment variability with and without a marine reserve.

Many rockfish species are long-lived and thought to be susceptible to being overfished. Hypotheses about the importance of older female rockfish to population persistence have led to arguments that marine reserves are needed to ensure the sustainability of rockfish populations. However, the implications of these hypotheses for rockfish population dynamics are still unclear.

Fisheries portfolio diversification and turnover buffer Alaskan fishing communities from abrupt resource and market changes.

Abrupt shifts in natural resources and their markets are a ubiquitous challenge to human communities. Building resilient social-ecological systems requires approaches that are robust to uncertainty and to regime shifts. Harvesting diverse portfolios of natural resources and adapting portfolios in response to change could stabilize economies reliant on natural resources and their markets, both of which are prone to unpredictable shifts.

Fisheries management impacts on target species status.

Fisheries management systems around the world are highly diverse in their design, operation, and effectiveness at meeting objectives. A variety of management institutions, strategies, and tactics are used across disparate regions, fishing fleets, and taxonomic groups. At a global level, it is unclear which particular management attributes have greatest influence on the status of fished populations, and also unclear which external factors affect the overall success of fisheries management systems.