Publications by authors named "Ranganathan R"

A characteristic feature of redundancy in the motor system is the ability to compensate for the failure of individual motor elements without affecting task performance. In this study, we examined the pattern and variability in error compensation between motor elements during a virtual task. Participants performed a redundant cursor control task with finger movements.

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Understanding protein function would be facilitated by direct, real-time observation of chemical kinetics in the atomic structure. The selectivity filter (SF) of the K channel provides an ideal model, catalyzing the dehydration and transport of K ions across the cell membrane through a narrow pore. We used a "pump-probe" method called electric-field-stimulated time-resolved X-ray crystallography (EFX) to initiate and observe K conduction in the NaK2K channel in both directions on the timescale of the transport process.

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Nanoparticles have been of significant interest in various biomedical domains such as drug delivery, gene delivery, cytotoxicity analysis, and imaging. Despite the synthesis of a variety of nanoparticles, their cellular uptake efficiency remains a substantial obstacle, with only a small fraction of delivered nanoparticles (NPs) have been reported to traverse the cell membrane within 24 h. Consequently, higher doses are often necessitated, leading to increased toxicity concerns.

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  • Craniosynostosis (CS) is a condition where cranial sutures fuse prematurely, affecting 1 in 2,000-2,500 children, and can be categorized as syndromic or nonsyndromic based on the affected sutures.
  • An 8-year-old girl displayed signs of CS, and genetic testing identified a mutation linked to craniosynostosis-4, while her dental evaluation revealed unerupted teeth and cavities.
  • Treatment involved addressing dental issues, and the significance of CS includes its genetic basis, often involving new mutations, with associated complications like facial changes and developmental delays.
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  • The text discusses a new framework called BioM3 that allows for the design of proteins using natural language prompts, integrating text and protein representation in a novel way.
  • This framework operates in three stages: aligning protein and text representations, refining text embeddings, and generating protein sequences using a specific model.
  • BioM3 has shown impressive results in various protein-related tasks and successfully generates proteins with characteristics similar to naturally occurring ones, validated through experimental tests.
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Background: The ability to relearn a lost skill is critical to motor recovery after a stroke. Previous studies indicate that stroke typically affects the processes underlying motor control and execution but not the learning of those skills. However, these studies could be confounded by the presence of significant motor impairments.

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Conventional approaches to enhance movement coordination, such as providing instructions and visual feedback, are often inadequate in complex motor tasks with multiple degrees of freedom (DoFs). To effectively address coordination deficits in such complex motor systems, it becomes imperative to develop interventions grounded in a model of human motor learning; however, modeling such learning processes is challenging due to the large DoFs. In this paper, we present a computational motor learning model that leverages the concept of motor synergies to extract low-dimensional learning representations in the high-dimensional motor space and the internal model theory of motor control to capture both fast and slow motor learning processes.

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  • Bell's palsy is a common cause of sudden facial weakness and is usually linked to viral infections, but a rare case of idiopathic bilateral Bell's palsy is discussed.
  • The case involves a 31-year-old male who experienced progressive facial weakness accompanied by neck and jaw pain, leading to complete paralysis on both sides of his face.
  • Despite normal examination results and a clear CT scan, the diagnosis of bilateral Bell's palsy was confirmed, highlighting the need for thorough evaluations when assessing acute facial weakness.
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Motor learning does not occur on a 'blank slate', but in the context of prior coordination solutions. The role of prior coordination solutions is likely critical in redundant tasks where there are multiple solutions to achieve the task goal - yet their influence on subsequent learning is currently not well understood. Here we addressed this issue by having human participants learn a redundant virtual shuffleboard task, where they held a bimanual manipulandum and made a discrete throwing motion to slide a virtual puck towards a target.

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Evolution-based deep generative models represent an exciting direction in understanding and designing proteins. An open question is whether such models can learn specialized functional constraints that control fitness in specific biological contexts. Here, we examine the ability of generative models to produce synthetic versions of Src-homology 3 (SH3) domains that mediate signaling in the Sho1 osmotic stress response pathway of yeast.

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Body-machine interfaces (BoMIs)-systems that control assistive devices (e.g., a robotic manipulator) with a person's movements-offer a robust and non-invasive alternative to brain-machine interfaces for individuals with neurological injuries.

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Introduction: Oral nicotine pouches (ONPs) are a new class of nicotine products. This scoping review summarizes evidence on ONPs and explores their potential public health impact.

Aims And Methods: We conducted a structured literature search for empirical studies across three electronic databases through January 10, 2024.

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Introduction: Nonmetropolitan populations face frequent health care access barriers compared to their metropolitan counterparts, but differences in the number of these barriers across groups are not known. Our objective was to examine the differences in health care access barriers across metropolitan, micropolitan, and noncore populations.

Methods: We used Behavioral Risk Factor Surveillance System data from the optional "Health Care Access" module to perform a cross-sectional analysis examining access barriers across levels of rurality using bivariate analyses and Poisson models.

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We have studied the rotational diffusion of two prolate nitroxide probes, the doubly negatively charged peroxylamine disulfonate (Frémy's salt - FS) and neutral di--butyl nitroxide (DTBN), in a series of 1-alkyl-3-methylimidazolium tetrafluoroborate room-temperature ionic liquids (RTILs) having alkyl chain lengths from two to eight carbons using electron paramagnetic resonance (EPR) spectroscopy. Though the size and shape of the probes are reasonably similar, they behave differently due to the charge difference. The rotation of FS is anisotropic, and the rotational anisotropy increases with the alkyl chain length of the cation, while the rotation of DTBN is isotropic.

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The ability to exfoliate transition metal diborides has led to a renewed interest in their prospect to be applied as catalysts for electrochemical reactions. This is due to an enhanced access to the unprecedented interfaces these nanomaterials offer. In this work, we show that nanosheets exfoliated from TiB exhibit vacancies that facilitate an excellent interface for catalyzing nitrogen reduction reaction (NRR).

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Background: The ability to relearn a lost skill is critical to motor recovery after a stroke. Previous studies indicate that stroke typically affects the processes underlying motor control and execution but not the learning of those skills. However, these prior studies could have been confounded by the presence of significant motor impairments and/or have not focused on motor acuity tasks (i.

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Proteins are molecular machines and to understand how they work, we need to understand how they move. New pump-probe time-resolved X-ray diffraction methods open up ways to initiate and observe protein motions with atomistic detail in crystals on biologically relevant timescales. However, practical limitations of these experiments demands parallel development of effective molecular dynamics approaches to accelerate progress and extract meaning.

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High-performance natural materials with superior mechanical properties often possess a hierarchical structure across multiple length scales. Nacre, also known as the mother of pearl, is an example of such a material and exhibits remarkable strength and toughness. The layered hierarchical architecture across different length scales is responsible for the efficient toughness and energy dissipation.

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Autologous dendritic cell (DC)-based immunotherapy is a cell-based advanced therapy medicinal product (ATMP) that was first introduced more than three decades ago. In the current study, our objective was to establish a harmonized protocol using two varied antigenic sources and a good manufacturing practice (GMP)-compliant, manual method for generating clinical-grade DCs at a limited-resource academic setting. After obtaining ethical committee-approved informed consent, the recruited patients underwent leukapheresis, and single-batch DC production was carried out.

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Article Synopsis
  • A major goal in biomedical science is to understand the internal dynamics of proteins and biological macromolecules to enhance their functions and create new ones.
  • The BioCARS facility at Argonne National Laboratory, developed by Keith Moffat, provides advanced x-ray scattering technologies that allow researchers to observe these dynamics at atomic resolution across various timescales.
  • This review discusses the experimental challenges in studying macromolecular dynamics and outlines the current capabilities at BioCARS, highlighting its significance for advancing the field.
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A research work was undergone in a virtual bone reduction process for reconstruction of the comminuted pelvic bone fracture using a CT scan dataset of patients. This includes segmentation, 3D model optimization and bone registration technique. The accuracy of the reconstructed bone model was validated using Finite Element Method.

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  • This study examines the effectiveness of advanced MRI imaging techniques for assessing perianal fistulas and their recurrence, highlighting the significance of accurate imaging in reducing surgical complications.
  • Forty-four patients underwent various MRI sequences, including contrast-enhanced 3D T1 imaging, to evaluate the detection of fistula types and internal orifices, with surgical results serving as the benchmark.
  • The results demonstrated that the 3D techniques (SPACE and VIBE) provided superior sensitivity and visibility for identifying fistulas and abscesses compared to conventional 2D methods, while also requiring shorter scan times.
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Deep generative models (DGMs) have shown great success in the understanding and data-driven design of proteins. Variational autoencoders (VAEs) are a popular DGM approach that can learn the correlated patterns of amino acid mutations within a multiple sequence alignment (MSA) of protein sequences and distill this information into a low-dimensional latent space to expose phylogenetic and functional relationships and guide generative protein design. Autoregressive (AR) models are another popular DGM approach that typically lacks a low-dimensional latent embedding but does not require training sequences to be aligned into an MSA and enable the design of variable length proteins.

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Antibiotic resistance (ABR) is a global health threat with the potential to cause mortality and morbidity on an unprecedented scale. In the past, civil society organizations (CSOs) have been successful in complementing the efforts of government health systems, thereby shaping the course of various public health programs, especially in low- and middle-income countries (LMICs). This article reports the outcomes of a CSO sensitization workshop held by one of the regional nodes of ReAct and highlights the perspectives of CSOs on their role in supporting the implementation of national and sub-national action plans for AMR mitigation.

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