Publications by authors named "Ranatunga R"

Canine vector-borne infections (CVBIs) are a global health problem. The military working dogs of Sri Lanka die at an early age, and CVBIs have been a leading speculated cause. We examined CVBIs in the working dogs of the Sri Lanka air force (SLAF) and free-roaming dogs (FRDs) and privately owned dogs (PODs) country-wide.

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  • Taiwan aims for net-zero carbon emissions by 2050 but lacks clarity on its current carbon sinks, prompting a study of these natural resources.
  • The study estimates carbon sinks from forests, sediments, and oceans to be significantly lower than Taiwan's carbon emissions, highlighting a gap that needs addressing.
  • To achieve carbon neutrality, strategies involving electric vehicles, renewable energy, and innovative carbon dioxide removal methods are recommended, alongside improved assessment of existing carbon sinks.
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  • The study highlights the severe impact of marine debris on mangrove ecosystems in Negombo lagoon, Sri Lanka, where approximately 9.83% of the substrate is covered by debris, primarily single-use plastics.
  • Higher levels of debris were found at Kadolkele (18.80%) compared to Molekadolwetiya (0.85%), indicating significant pollution in these areas.
  • The research demonstrates that marine debris correlates with physical damage to mangrove roots and seedlings, suggesting urgent need for remedial actions to reduce and remove debris to protect these crucial coastal habitats.
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The silky shark, Carcharhinus falciformis, is a cosmopolitan species commonly caught as a bycatch for longline fisheries. However, the genetic stock structure for the Indo-Pacific Ocean is not well-defined yet. Here, we used eight microsatellite loci to examine the genetic stock structure and effective population size of 307 silky sharks across 5 Indo-Pacific sampling locations.

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Dendritic spines are small, dynamic protrusions along the dendrite that comprise more than 90% of excitatory connections in the brain, making them essential sites for neuronal communication. These synaptic sites change throughout the process of development, reducing in density and shifting morphology as synapses are refined. One important class of dendritic spine regulators is microRNA (miRNA), small-noncoding RNAs that post-transcriptionally regulate gene expression.

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Dendritic spines are small, dynamic protrusions along the dendrite that comprise more than 90% of excitatory connections in the brain, making them essential sites for neuronal communication. These synaptic sites change throughout the process of development, reducing in density and shifting morphology as synapses are refined. One important class of dendritic spine regulators is microRNA (miRNA), small noncoding RNAs that post-transcriptionally regulate gene expression.

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  • The aquaculture industry’s rapid expansion is increasing nutrient and organic carbon levels in coastal areas, potentially causing eutrophication and higher greenhouse gas emissions.
  • Sarcordia suae, a red macroalga, has been identified as effective for capturing CO and removing nutrients from aquaculture wastewater, especially when grown in temperature-controlled systems.
  • The study showed that a solar-powered cooling system improved carbon capture rates and demonstrated the efficiency of using this seaweed for nitrogen and phosphorus removal, creating a sustainable solution for wastewater treatment in subtropical regions.
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Purpose: Babesiosis is one of the most important globally extended and quickly spreading tick-borne infections of dogs. Diagnosis of babesiosis in Sri Lanka is based on clinical signs followed by thin blood smears which could be error-prone due to undetected early infections, absence of clinical signs or low parasitemia. The present study investigated the prevalence of babesiosis in dogs presented to the Veterinary Teaching Hospital (VTH) at the Faculty of Veterinary Medicine and Animal Science, University of Peradeniya, for treatments, vaccinations, and regular check-ups, and compared the diagnosis methods of microscopy and molecular analysis.

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In gene therapy utilising short interfering RNA (siRNA), delivery of the siRNA therapeutics to the target site is a major obstacle, due to low cellular uptake. Efficient delivery systems such as cell penetrating peptides (CPPs) are in the forefront for the development of efficient, safe, non-viral gene delivery. The C6 peptide series are a class of synthetic CPPs, developed specifically for the delivery of siRNA.

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The major risk of microplastics in marine environments is the bioaccumulation in marine organisms. Plastic ingestion by marine organisms has been investigated and recently more attention has been given to microplastics in seafood. However, it is seldom reported the occurrence of microplastics in marine commercial dried fish products available for human consumption.

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This study provides the first assessment of marine debris washed ashore on 22 beaches along the coast of Sri Lanka. There was an average of 4.1 large (>25 mm) and 158 small (5-25 mm) pieces of debris per square meter of beach.

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  • * This study investigates the binding affinities of seventeen different CPPs, categorized into cationic, amphipathic, and hydrophobic types, focusing on their ability to complex with siRNA.
  • * Results show that amphipathic CPPs have the strongest binding, with initial interactions occurring in the major groove of siRNA and subsequent interactions in the minor groove, ultimately forming a positively charged nanoparticle for easier cell entry.
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This review is based on carriers of natural origin such as polysaccharides, proteins, and cell derived entities which have been used for delivery of siRNA. To realize the therapeutic potential of a delivery system, the role of the carrier is of utmost importance. Historical aspects of viral vectors, the first carriers of genes are briefly outlined.

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In Förster resonance energy transfer (FRET) experiments, extracting accurate structural information about macromolecules depends on knowing the positions and orientations of donor and acceptor fluorophores. Several approaches have been employed to reduce uncertainties in quantitative FRET distance measurements. Fluorophore-position distributions can be estimated by surface accessibility (SA) calculations, which compute the region of space explored by the fluorophore within a static macromolecular structure.

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To minimize the change of lignocellulosic hydrolysate composition during storage, the effects of storage conditions (temperature, pH and time) on the composition and fermentability of hydrolysate prepared from AFEX™ (Ammonia Fiber Expansion - a trademark of MBI, Lansing, MI) pretreated corn stover were investigated. Precipitates formed during hydrolysate storage increased with increasing storage pH and time. The precipitate amount was the least when hydrolysate was stored at 4 °C and pH 4.

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The physical properties of a liquid in contact with a solid are largely determined by the solid-liquid surface tension. This is especially true for nanoscale systems with high surface area to volume ratios. While experimental techniques can only measure surface tension indirectly for nanoscale systems, computer simulations offer the possibility of a direct evaluation of solid-liquid surface tension although reliable methods are still under development.

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A common interpretation of the observation that two processes exhibit similar compensation temperatures in an enthalpy-entropy plot is that the two processes occur via the same "mechanism". We show that this interpretation is not rigorously allowed. In fact, the only thing that can be concluded from the observation of identical compensation temperatures is that the relative contributions of enthalpy and entropy to the overall free energy are the same in the two processes.

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Solid phase microextraction (SPME) coupled with GC has been applied to study the binding properties between bovine serum albumin (BSA) and volatile organic compounds such as benzene, toluene, ethylbenzene, propylbenzene and butylbenzene. Their protein-ligand equilibrium constants have been determined. The measurement of free and bound ligand concentrations in the aqueous solution was based on the equilibrium among the analyte in the fiber coating (Cf), headspace (Ch) and aqueous solution (Cs).

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The goal of this study was to elucidate the roles played by the stationary and mobile phases in retention in reversed-phase liquid chromatography (RPLC) in terms of their individual enthalpic and entropic contribution to the Gibbs free energy of retention. The experimental approach involved measuring standard enthalpies of transfer of alkylbenzenes from typical mobile phases used in RPLC (methanol/water and acetonitrile/water mixtures), as well as from n-hexadecane (a simple analogue of the stationary phase) to the gas phase, using high-precision headspace gas chromatography. By combining the measured enthalpies with independently measured free energies of transfer, the entropies of transfer were obtained.

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