Publications by authors named "Ramiz Somjee"

The role of transcription factors in photoreceptor gene regulation is fairly well understood, but knowledge of the cell-type-specific function of transcriptional cofactors remains incomplete. Here, we show that the transcriptional corepressor promotes rod differentiation and represses short-wavelength cone genes in long-wavelength cones in zebrafish. In retinas, red cones are transformed into hybrid red/ultraviolet (UV) cones, green cones are absent, the number of blue cones is approximately doubled, and the number of rods is greatly reduced.

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Article Synopsis
  • * Study of 166 FOs in HeLa cells showed that 58% could form these condensates, indicating distinct physical and chemical properties based on their cellular roles and functions.
  • * Machine learning methods predicted that out of ~3000 additional FOs, 67% are likely to form condensates, suggesting significant implications for their roles in gene expression and cell signaling.
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Biomolecular condensates form through a process termed phase separation and play diverse roles throughout the cell. Proteins that undergo phase separation often have disordered regions that can engage in weak, multivalent interactions; however, our understanding of the sequence grammar that defines which proteins phase separate is far from complete. Here, we show that proteins that display a high density of charged tracts within intrinsically disordered regions are likely to be constituents of electrostatically organized biomolecular condensates.

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