Publications by authors named "R L Durbin"

The number of species with high-quality genome sequences continues to increase, in part due to the scaling up of multiple large-scale biodiversity sequencing projects. While the need to annotate genic sequences in these genomes is widely acknowledged, the parallel need to annotate transposable element (TE) sequences that have been shown to alter genome architecture, rewire gene regulatory networks, and contribute to the evolution of host traits is becoming ever more evident. However, accurate genome-wide annotation of TE sequences is still technically challenging.

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Moths and butterflies (Lepidoptera) have a heterogametic sex chromosome system with females carrying ZW chromosomes and males ZZ. The lack of W chromosomes in early-diverging lepidopteran lineages has led to the suggestion of an ancestral Z0 system in this clade and a B chromosome origin of the W. This contrasts with the canonical model of W chromosome evolution in which the W would have originated from the same homologous autosomal pair as the Z chromosome.

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Article Synopsis
  • The neural crest (NC) is a unique group of embryonic cells in vertebrates that contribute to key features like craniofacial structures and pigmentation, yet its role in species diversity is not well-understood.
  • This study focused on the diverse cichlid species from the African Great Lakes, using advanced genetic analyses to explore how the NC's genetic program evolved alongside their physical differences.
  • Findings highlighted significant variations in gene expression related to NC development, particularly in the sox10 gene family, with experiments showing that these genes have distinct roles that influence morphological traits across different cichlid species.
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We present a genome assembly from an individual (the Dracula fish; Chordata; Actinopterygii; Cypriniformes; Danionidae; Danioninae). The genome sequence is 665.21 megabases in span.

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