A comparison of diffusion tractography techniques in simulating the generalized Ising model to predict the intrinsic activity of the brain.

Diffusion tractography is a non-invasive technique that is being used to estimate the location and direction of white matter tracts in the brain. Identifying the characteristics of white matter plays an important role in research as well as in clinical practice that relies on finding the relationship between the structure and function of the brain. An Ising model implemented on a structural connectivity (SC) has proven to explain the spontaneous fluctuations in the brain at criticality using brain's structure depicted by white matter tracts.

The Emergence of Integrated Information, Complexity, and 'Consciousness' at Criticality.

Integrated Information Theory (IIT) posits that integrated information ( Φ ) represents the quantity of a conscious experience. Here, the generalized Ising model was used to calculate Φ as a function of temperature in toy models of fully connected neural networks. A Monte-Carlo simulation was run on 159 normalized, random, positively weighted networks analogous to small five-node excitatory neural network motifs.

Consciousness and the Dimensionality of DOC Patients via the Generalized Ising Model.

The data from patients with severe brain injuries show complex brain functions. Due to the difficulties associated with these complex data, computational modeling is an especially useful tool to examine the structure-function relationship in these populations. By using computational modeling for patients with a disorder of consciousness (DoC), not only we can understand the changes of information transfer, but we also can test changes to different states of consciousness by hypothetically changing the anatomical structure.

Role of Dimensionality in Predicting the Spontaneous Behavior of the Brain Using the Classical Ising Model and the Ising Model Implemented on a Structural Connectome.

There is accumulating evidence that spontaneous fluctuations of the brain are sustained by a structural architecture of axonal fiber bundles. Various models have been used to investigate this structure-function relationship. In this work, we implemented the Ising model using the number of fibers between each pair of brain regions as input.

A method for independent component graph analysis of resting-state fMRI.

Introduction: Independent component analysis (ICA) has been extensively used for reducing task-free BOLD fMRI recordings into spatial maps and their associated time-courses. The spatially identified independent components can be considered as intrinsic connectivity networks (ICNs) of non-contiguous regions. To date, the spatial patterns of the networks have been analyzed with techniques developed for volumetric data.