Publications by authors named "Plyusnina T"

Myocardial edema is a common symptom of pathological processes in the heart, causing aggravation of cardiovascular diseases and leading to irreversible myocardial remodeling. Patient-based studies show that myocardial edema is associated with arrhythmias. Currently, there are no studies that have examined how edema may influence changes in calcium dynamics in the functional syncytium.

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Article Synopsis
  • Photosystem II (PSII) is a key component of photosynthesis that is highly sensitive to environmental changes, and its properties vary among different autotrophic organisms, contributing to their stress resilience.
  • A new mathematical modeling approach has been developed to analyze the oxygen-evolving complex and light-harvesting characteristics of PSII, utilizing chlorophyll a fluorescence dynamics in samples treated with a specific inhibitor.
  • This model simplifies the analysis into three ordinary differential equations, allowing for the study of PSII heterogeneity across various organisms and environmental conditions, leading to insights into their adaptability and stress responses.
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The effect of the toxicant 2,3',4,4',6-pentachlorobiphenyl (PCB-119) on the growth, chlorophyll content, and PSII activity of C. sorokiniana cells was investigated. A strong negative effect of the toxicant was observed at PCB concentration of 0.

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  • The investigation focused on modeling and understanding the regulation of electron transport processes in the photosynthetic membrane using mathematical and computer simulations at Lomonosov Moscow State University.
  • Detailed kinetic models were created to analyze thylakoid membrane processes and using data fitting techniques, researchers were able to infer previously undetermined parameters.
  • This research utilized various modeling methods, including agent-based Monte Carlo modeling and multiparticle simulations, to explore the dynamics and interactions at molecular and subcellular levels involved in photosynthesis.
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Monitoring of the photosynthetic activity of natural and artificial biocenoses is of crucial importance. Photosynthesis is the basis for the existence of life on Earth, and a decrease in primary photosynthetic production due to anthropogenic influences can have catastrophic consequences. Currently, great efforts are being made to create technologies that allow continuous monitoring of the state of the photosynthetic apparatus of terrestrial plants and microalgae.

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The paper presents the results of recent work at the Department of Biophysics of the Biological Faculty, Lomonosov Moscow State University on the kinetic and multiparticle modeling of processes in the photosynthetic membrane. The detailed kinetic models and the rule-based kinetic Monte Carlo models allow to reproduce the fluorescence induction curves and redox transformations of the photoactive pigment P700 in the time range from 100 ns to dozens of seconds and make it possible to reveal the role of individual carriers in their formation for different types of photosynthetic organisms under different illumination regimes, in the presence of inhibitors, under stress conditions. The fitting of the model curves to the experimental data quantifies the reaction rate constants that cannot be directly measured experimentally, including the non-radiative thermal relaxation reactions.

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Using a mathematical simulation approach, we studied the dynamics of the green microalga phosphate metabolism response to shortage and subsequent replenishing of inorganic phosphate in the medium. A three-pool interaction model was used to describe the phosphate uptake from the medium, its incorporation into the cell organic compounds, its storage in the form of polyphosphates, and culture growth. The model comprises a system of ordinary differential equations.

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The development of high-performance photobioreactors equipped with automatic systems for non-invasive real-time monitoring of cultivation conditions and photosynthetic parameters is a challenge in algae biotechnology. Therefore, we developed a chlorophyll (Chl) fluorescence measuring system for the online recording of the light-induced fluorescence rise and the dark relaxation of the flash-induced fluorescence yield (Qa - re-oxidation kinetics) in photobioreactors. This system provides automatic measurements in a broad range of Chl concentrations at high frequency of gas-tight sampling, and advanced data analysis.

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The method for analysis of chlorophyll fluorescence transient using approximation of measured signal by multi-exponential series is described. Visualization of partial sums of this series allows us to find amplitudes and characteristic times of individual phases of fluorescence induction curve. This method gives more rigid criteria of phase identification instead of semi-empirical approach currently used.

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The metabolic networks are the most well-studied biochemical systems, with an abundance of in vitro and in vivo data available for quantitative estimation of its kinetic parameters. In this chapter, we present our approach to developing mathematical description of metabolic pathways. The model-based integration of reaction kinetics and the utilization of different types of experimental data including temporal dependencies have been described in detail.

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The magnitudes of startle reactions, consisting of shuddering in response to acoustic signals, were studied in rats selected for predisposition to different types of defensive behavior-rats with and without passive defensive freezing reactions (catalepsy), and Norway rats selected for a lack of defensive aggression to humans or for high levels of aggression; studies were performed in an SR-Pilot apparatus. These experiments showed that expression of the startle reaction to standard sound signal in rats with a genetic predisposition to catalepsy was double that in control Wistar rats. A similar but greater difference was seen between highly aggressive and non-aggressive rats: the amplitude of the startle reaction in rats with high levels of active defensive responses was three times that in rats showing no aggression towards humans.

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