Structural Brain Connectivity and Treatment Improvement in Mood Disorder.

The treatment of depressive episodes is well established, with clearly demonstrated effectiveness of antidepressants and psychotherapies. However, more than one-third of depressed patients do not respond to treatment. Identifying the brain structural basis of treatment-resistant depression could prevent useless pharmacological prescriptions, adverse events, and lost therapeutic opportunities.

Deep Learning-Based Localization of EEG Electrodes Within MRI Acquisitions.

The simultaneous acquisition of electroencephalographic (EEG) signals and functional magnetic resonance images (fMRI) aims to measure brain activity with good spatial and temporal resolution. This bimodal neuroimaging can bring complementary and very relevant information in many cases and in particular for epilepsy. Indeed, it has been shown that it can facilitate the localization of epileptic networks.

Acquisition Duration in Resting-State Arterial Spin Labeling. How Long Is Enough?

Resting-state Arterial Spin Labeling (rs-ASL) is a rather confidential method compared to resting-state BOLD. As ASL allows to quantify the cerebral blood flow, unlike BOLD, rs-ASL can lead to significant clinical subject-scaled applications. Despite directly impacting clinical practicability and functional networks estimation, there is no standard for rs-ASL regarding the acquisition duration.

A Sparse EEG-Informed fMRI Model for Hybrid EEG-fMRI Neurofeedback Prediction.

Measures of brain activity through functional magnetic resonance imaging (fMRI) or electroencephalography (EEG), two complementary modalities, are ground solutions in the context of neurofeedback (NF) mechanisms for brain rehabilitation protocols. While NF-EEG (in which real-time neurofeedback scores are computed from EEG signals) has been explored for a very long time, NF-fMRI (in which real-time neurofeedback scores are computed from fMRI signals) appeared more recently and provides more robust results and more specific brain training. Using fMRI and EEG simultaneously for bi-modal neurofeedback sessions (NF-EEG-fMRI, in which real-time neurofeedback scores are computed from fMRI and EEG) is very promising for the design of brain rehabilitation protocols.

Patch-based super-resolution of arterial spin labeling magnetic resonance images.

Arterial spin labeling is a magnetic resonance perfusion imaging technique that, while providing results comparable to methods currently considered as more standard concerning the quantification of the cerebral blood flow, is subject to limitations related to its low signal-to-noise ratio and low resolution. In this work, we investigate the relevance of using a non-local patch-based super-resolution method driven by a high resolution structural image to increase the level of details in arterial spin labeling images. This method is evaluated by comparison with other image dimension increasing techniques on a simulated dataset, on images of healthy subjects and on images of subjects scanned for brain tumors, who had a dynamic susceptibility contrast acquisition.

Longitudinal multiple sclerosis lesion segmentation: Resource and challenge.

In conjunction with the ISBI 2015 conference, we organized a longitudinal lesion segmentation challenge providing training and test data to registered participants. The training data consisted of five subjects with a mean of 4.4 time-points, and test data of fourteen subjects with a mean of 4.

An a contrario approach for the detection of patient-specific brain perfusion abnormalities with arterial spin labelling.

In this paper, we introduce a new locally multivariate procedure to quantitatively extract voxel-wise patterns of abnormal perfusion in individual patients. This a contrario approach uses a multivariate metric from the computer vision community that is suitable to detect abnormalities even in the presence of closeby hypo- and hyper-perfusions. This method takes into account local information without applying Gaussian smoothing to the data.

Classification of multiple sclerosis lesions using adaptive dictionary learning.

This paper presents a sparse representation and an adaptive dictionary learning based method for automated classification of multiple sclerosis (MS) lesions in magnetic resonance (MR) images. Manual delineation of MS lesions is a time-consuming task, requiring neuroradiology experts to analyze huge volume of MR data. This, in addition to the high intra- and inter-observer variability necessitates the requirement of automated MS lesion classification methods.

Hemodynamic quantification in brain arteriovenous malformations with time-resolved spin-labeled magnetic resonance angiography.

Background And Purpose: Unenhanced time-resolved spin-labeled magnetic resonance angiography enables hemodynamic quantification in arteriovenous malformations (AVMs). Our purpose was to identify quantitative parameters that discriminate among different AVM components and to relate hemodynamic patterns with rupture risk.

Methods: Sixteen patients presenting with AVMs (7 women, 9 men; mean age 37.

Robust estimation of the cerebral blood flow in arterial spin labelling.

The introduction of arterial spin labelling (ASL) techniques in magnetic resonance imaging (MRI) has made feasible a non-invasive measurement of the cerebral blood flow (CBF). However, to date, the low signal-to-noise ratio of ASL gives us no option but to repeat the acquisition to accumulate enough data in order to get a reliable signal. The perfusion signal is then usually extracted by averaging across the repetitions.

Patient-specific detection of perfusion abnormalities combining within-subject and between-subject variances in Arterial Spin Labeling.

In this paper, patient-specific perfusion abnormalities in Arterial Spin Labeling (ASL) were identified by comparing a single patient to a group of healthy controls using a mixed-effect hierarchical General Linear Model (GLM). Two approaches are currently in use to solve hierarchical GLMs: (1) the homoscedastic approach assumes homogeneous variances across subjects and (2) the heteroscedastic approach is theoretically more efficient in the presence of heterogeneous variances but algorithmically more demanding. In practice, in functional magnetic resonance imaging studies, the superiority of the heteroscedastic approach is still under debate.

A comprehensive framework for the detection of individual brain perfusion abnormalities using arterial spin labeling.

Arterial spin labeling (ASL) enables measuring cerebral blood flow in MRI without injection of a contrast agent. Perfusion measured by ASL carries relevant information for patients suffering from pathologies associated with singular perfusion patterns. However, to date, individual identification of abnormal perfusion patterns in ASL usually relies on visual inspection or manual delineation of regions of interest.