Long-term video and genetic data yield insights into complex sociality of a solitary large carnivore.

American black bears (Ursus americanus) may be more social than currently understood. We used long-term video and genetic data to evaluate social interactions among wild, independent-aged black bear on a conservation property in western Montana, USA. We used multinomial logistic regression to evaluate predictions about male-male interactions within the context of individual fitness, female-female interactions within the context of inclusive fitness, and male-female interactions within the context of female counterstrategies to infanticide.

Weight retention and expansion of popular lead-based and lead-free hunting bullets.

Hunting bullets are often comprised of a lead core covered with a copper alloy jacket. When the bullet collides with an animal, particles-sometimes millions-can shed from the projectile and embed in animal tissues. Those lead fragments can persist in game meat and remain in the discarded viscera that many wildlife species scavenge.

The seasonal threat of lead exposure in bald eagles.

Bald eagles often scavenge hunting remains embedded with lead bullet fragments, which debilitate and kill many eagles. Measuring blood lead concentrations (BLC) in free-flying bald eagles and those received by rehabilitators allows researchers to both actively and opportunistically monitor exposure. From 2012 to 2022, we captured 62 free-flying bald eagles and measured their BLC following the big-game hunting season in Montana, USA, which occurs from late October through late November.

Age-specific, population-level pedigree of wild black bears provides insights into reproduction, paternity, and maternal effects on offspring apparent survival.

Wildlife pedigrees provide insights into ecological and evolutionary processes. DNA obtained from noninvasively collected hair is often used to determine individual identities for pedigrees and other genetic analyses. However, detection rates associated with some noninvasive DNA studies can be relatively low, and genetic data do not provide information on individual birth year.

Do the evolutionary interactions between moths and bats promote niche partitioning between bats and birds?

Ecological theory suggests that the coexistence of species is promoted by the partitioning of available resources, as in dietary niche partitioning where predators partition prey. Yet, the mechanisms underlying dietary niche partitioning are not always clear. We used fecal DNA metabarcoding to investigate the diets of seven nocturnal insectivorous bird and bat species.

Response of a remnant marmot population to habitat enhancement yields insights into marmot ecology.

We evaluated the response of a remnant population of yellow-bellied marmots () to targeted habitat enhancement in an ecological system that had been degraded during ~100 years of intensive livestock management, including marmot eradication. We used capture-recapture data and a novel use of a multistate framework to evaluate geographic expansion of the marmot population pre- and post-habitat enhancement. We also estimated age-structured survival, reproduction, and sex ratios.

Do soil bacterial communities respond differently to abrupt or gradual additions of copper?

Many experiments that measure the response of microbial communities to heavy metals increase metal concentrations abruptly in the soil. However, it is unclear whether abrupt additions mimic the gradual and often long-term accumulation of these metals in the environment where microbial populations may adapt. In a greenhouse experiment that lasted 26 months, we tested whether bacterial communities and soil respiration differed between soils that received an abrupt or a gradual addition of copper or no copper at all.

Do invasive plants structure microbial communities to accelerate decomposition in intermountain grasslands?

Invasive plants are often associated with greater productivity and soil nutrient availabilities, but whether invasive plants with dissimilar traits change decomposer communities and decomposition rates in consistent ways is little known. We compared decomposition rates and the fungal and bacterial communities associated with the litter of three problematic invaders in intermountain grasslands; cheatgrass (), spotted knapweed () and leafy spurge (), as well as the native bluebunch wheatgrass (). Shoot and root litter from each plant was placed in cheatgrass, spotted knapweed, and leafy spurge invasions as well as remnant native communities in a fully reciprocal design for 6 months to see whether decomposer communities were species-specific, and whether litter decomposed fastest when placed in a community composed of its own species (referred to hereafter as home-field advantage-HFA).

Strong indirect herbicide effects on mycorrhizal associations through plant community shifts and secondary invasions.

Million of acres of U.S. wildlands are sprayed with herbicides to control invasive species, but relatively little is known about non-target effects of herbicide use.

Invasive Plants Rapidly Reshape Soil Properties in a Grassland Ecosystem.

Plant invasions often reduce native plant diversity and increase net primary productivity. Invaded soils appear to differ from surrounding soils in ways that impede restoration of diverse native plant communities. We hypothesize that invader-mediated shifts in edaphic properties reproducibly alter soil microbial community structure and function.

Restoring ecological properties of acidic soils contaminated with elemental sulfur.

Elemental sulfur (S) accumulates in the environment from anthropogenic sources as a byproduct from oil and gas refining and from trap and skeet shooting targets. Bacteria can oxidize S to HSO, which acidifies soil. We explored whether combinations of soil amendments can be used to remediate acidic soils contaminated with S by restoring soil chemistry, plant growth, and bacterial communities in a greenhouse.

Extreme soil acidity from biodegradable trap and skeet targets increases severity of pollution at shooting ranges.

Lead pollution at shooting ranges overshadows the potential for contamination issues from trap and skeet targets. We studied the environmental influence of targets sold as biodegradable by determining the components of the targets and sampling soils at a former sporting clay range. Targets comprised approximately 53% CaCO3, 41% S(0), and 6% modifiers, and on a molar basis, there was 2.

Grassland invaders and their mycorrhizal symbionts: a study across climate and invasion gradients.

Controlled experiments show that arbuscular mycorrhizal fungi (AMF) can increase competitiveness of exotic plants, potentially increasing invasion success. We surveyed AMF abundance and community composition in Centaurea stoebe and Potentilla recta invasions in the western USA to assess whether patterns were consistent with mycorrhizal-mediated invasions. We asked whether (1) AMF abundance and community composition differ between native and exotic forbs, (2) associations between native plants and AMF shift with invading exotic plants, and (3) AMF abundance and/or community composition differ in areas where exotic plants are highly invasive and in areas where they are not.

Influence of preferred orientation on the electrical conductivity of fluorine-doped tin oxide films.

Current development of high-performance transparent conductive oxide (TCO) films is limited with tradeoff between carrier mobility and concentration since none of them can be improved without sacrificing the other. In this study, we prepare fluorine doped tin oxide (FTO) films by chemical vapor deposition with inclusions of different additives and report that the mobility can be varied from 0.65 to 28.

Heavy metal tolerance genes alter cellular thermodynamics in Pseudomonas putida and river Pseudomonas spp. and influence amebal predation.

Predation rates were measured for two Acanthamoeba castellanii strains feeding on metal-tolerant and metal-sensitive strains of Pseudomonas putida and compared with cellular thermodynamic data. Predation rates by A. castellanii strain ATCC 30010 correlated with cell volume of the prey.

Severe plant invasions can increase mycorrhizal fungal abundance and diversity.

Invasions by non-native plants can alter ecosystem functions and reduce native plant diversity, but relatively little is known about their effect on belowground microbial communities. We show that invasions by knapweed (Centaurea stoebe) and leafy spurge (Euphorbia esula, hereafter spurge)--but not cheatgrass (Bromus tectorum)--support a higher abundance and diversity of symbiotic arbuscular mycorrhizal fungi (AMF) than multi-species native plant communities. The higher AMF richness associated with knapweed and spurge is unlikely due to a co-invasion by AMF, because a separate sampling showed that individual native forbs hosted a similar AMF abundance and richness as exotic forbs.

Efficient biological process characterization by definitive-screening designs: the formaldehyde treatment of a therapeutic protein as a case study.

As part of the process-characterization campaign of a candidate vaccine product, a recently developed class of three-level designs-definitive-screening designs-was employed to select a quadratic model that describes the effect of six input process parameters, including protein concentration, formaldehyde-to-protein ratio, lysine concentration, reaction duration, pH, and reaction temperature, on a formylation protein-crosslinking reaction. This design requires only 17 experimental runs. The resulting model was then used to simulate 10,000 runs that account for the variability in the inputs expected on manufacturing scale.

Use of microcalorimetry to determine the costs and benefits to Pseudomonas putida strain KT2440 of harboring cadmium efflux genes.

A novel microcalorimetric approach was used to analyze the responses of a metal-tolerant soil bacterium (Pseudomonas putida strain KT2440) to metal resistance gene deletions in cadmium-amended media. As hypothesized, under cadmium stress, the wild-type strain benefited from the resistance genes by entering the exponential growth phase earlier than two knockout strains. In the absence of cadmium, strain KT1, carrying a deletion in the main component (czcA1) of a Cd/Zn chemiosmotic efflux transporter (CzcCBA1), grew more efficiently than the wild type and released ∼700 kJ (per mole of biomass carbon) less heat than the wild-type strain, showing the energetic cost of maintaining CzcCBA1 in the absence of cadmium.

Hyporheic microbial community development is a sensitive indicator of metal contamination.

Accurate natural resource damage assessment necessitates monitoring organisms or communities that respond most sensitively to contaminants. Observational studies have demonstrated a correlation between fluvial heavy metal deposition and hyporheic microbial community structure. To establish a causal relationship between sediment metal content and the structure of colonizing bacterial communities, we performed a controlled field experiment River sediments of 1.

Pedobacter nyackensis sp. nov., Pedobacter alluvionis sp. nov. and Pedobacter borealis sp. nov., isolated from Montana flood-plain sediment and forest soil.

Three Gram-negative, rod-shaped, non-spore-forming eubacterial strains were isolated in western Montana, USA, and subjected to taxonomic studies. Strains NWG-II14(T) and NWER-II11(T) were isolated from hyporheic sediments of a large alluvial flood plain, whereas strain G-1(T) was isolated from a conifer forest soil. On the basis of 16S rRNA gene sequence similarity, strains NWG-II14(T), NWER-II11(T) and G-1(T) were shown to belong to the family Sphingobacteriaceae and are most closely related to various species of the genus Pedobacter.

Power of pairwise comparisons in the equal variance and unequal sample size case.

A Monte Carlo simulation was conducted to compare five, pairwise multiple comparison procedures. The number of means varied from 4 to 6 and the sample size ratio varied from 1 to 60. Procedures were evaluated on the basis of Type I errors, any-pair power and all-pairs power.

Power and Type I errors for pairwise comparisons of means in the unequal variances case.

A Monte Carlo simulation was conducted to compare pairwise multiple comparison procedures. The number of means varied from 4 to 8 and the sample sizes varied from 2 to 500. Procedures were evaluated on the basis of Type I errors, any-pair power and all-pairs power.

Phylogeny of arbuscular mycorrhizal fungi predicts community composition of symbiosis-associated bacteria.

Many physicochemical and biotic aspects of the soil environment determine the community composition of bacteria. In this study, we examined the effects of arbuscular mycorrhizal fungi, common symbionts of higher plants, on the composition of bacterial communities after long-term (7-8 years) enrichment culture in the presence of a plant host. We showed that the phylogeny of arbuscular mycorrhizal fungal isolates was a highly significant predictor of bacterial community composition, as assessed by cluster analysis, redundancy analysis and linear discriminant analysis of phospholipid fatty acid patterns.

Relationship between communities and processes; new insights from a field study of a contaminated ecosystem.

We used a 93-year-old mine waste contamination gradient in alluvial soil to explore the relationship between ecosystem level functioning and community structure in a chronically stressed ecosystem. The sensitivity of broad functional parameters (in situ soil respiration, microbial biomass, above and below ground plant biomass) and microbial diversity [phospholipid fatty acid (PLFA) abundance and richness] were compared. Functional responses were linear with respect to contaminants while thresholds were detected in the community structural response to contamination along the gradient.

Determining rates of change and evaluating group-level resiliency differences in hyporheic microbial communities in response to fluvial heavy-metal deposition.

Prior field studies by our group have demonstrated a relationship between fluvial deposition of heavy metals and hyporheic-zone microbial community structure. Here, we determined the rates of change in hyporheic microbial communities in response to heavy-metal contamination and assessed group-level differences in resiliency in response to heavy metals. A controlled laboratory study was performed using 20 flowthrough river mesocosms and a repeated-measurement factorial design.