A combined nuclear magnetic resonance and molecular dynamics study of the two structural motifs for mixed-linkage beta-glucans: methyl beta-cellobioside and methyl beta-laminarabioside.

The conformational and hydration properties of the two disaccharides methyl beta-cellobioside and methyl beta-laminarabioside were investigated by NMR spectroscopy and explicit solvation molecular dynamics simulations using the carbohydrate solution force field (CSFF). Adiabatic maps produced with this force field displayed 4 minima A: (Phi=300 degrees , Psi=280 degrees), B: (Phi=280 degrees , Psi=210 degrees), C: (Phi=260 degrees , Psi=60 degrees), and D: (Phi=60 degrees , Psi=260 degrees) for methyl beta-cellobioside and 3 minima A: (Phi=290 degrees , Psi=130 degrees), B: (Phi=270 degrees , Psi=290 degrees), and C: (Phi=60 degrees , Psi=120 degrees) for methyl beta-laminarabioside. Molecular dynamics simulations were initiated from all minima.