Publications by authors named "Peifeng He"

Alzheimer's disease (AD) is the most common neurodegenerative disease, characterized by memory loss, speech and motor defects, personality changes, and psychological disorders. The exact cause of AD remains unclear. Current treatments focus on maintaining neurotransmitter levels or targeting β-amyloid (Aβ) protein, but these only alleviate symptoms and do not reverse the disease.

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Psoriasis is an inflammatory skin disease that relapses frequently. Keratinocyte apoptosis dysregulation plays a crucial role in the pathological mechanisms of psoriasis. PANoptosis is a process with intermolecular interaction among pyroptosis, apoptosis, and necroptosis.

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Introduction: In patients with rheumatoid arthritis (RA), the increased risk of concomitant type 2 diabetes mellitus (T2D) is an important contributor to increased mortality and decreased quality of life; however, the mechanisms and pathogenetic factors remain unknown.

Methods: In this study, we aimed to assess the risk factors for T2D in patients with RA. We recruited 206 healthy controls and 488 patients with RA, 160 of whom had comorbid T2D.

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Alzheimer's Disease (AD) is a neurodegenerative disorder, and various molecules associated with PANoptosis are involved in neuroinflammation and neurodegenerative diseases. This work aims to identify key genes, and characterize PANoptosis-related molecular subtypes in AD. Moreover, we establish a scoring system for distinguishing PANoptosis molecular subtypes and constructing diagnostic models for AD differentiation.

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Acute myeloid leukaemia (AML) is a highly heterogeneous disease, which lead to various findings in transcriptomic research. This study addresses these challenges by integrating 34 datasets, including 26 control groups, 6 prognostic datasets and 2 single-cell RNA sequencing (scRNA-seq) datasets to identify 10,000 AML-related genes (ARGs). We focused on genes with low variability and high consistency and successfully discovered 191 AML signatures (ASs).

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Background: For Rheumatoid Arthritis (RA), a long-term chronic illness, it is essential to identify and describe patient subtypes with comparable goal status and molecular biomarkers. This study aims to develop and validate a new subtyping scheme that integrates genome-scale transcriptomic profiles of RA peripheral blood genes, providing a fresh perspective for stratified treatments.

Methods: We utilized independent microarray datasets of RA peripheral blood mononuclear cells (PBMCs).

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Objective: Observational studies have identified a dual effect of circulating inflammatory proteins and immune cells on cancer progression. However, the specific mechanisms of action have not been clarified in the exacerbation of cutaneous-origin tumors. Therefore, this study aims to investigate whether the causal relationship between circulating inflammatory factors and basal cell carcinoma (BCC), cutaneous malignant melanoma (SKCM), and cutaneous squamous cell carcinoma (cSCC) is regulated by immune cells.

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An increasing number of immune-related adverse events (irAEs) induced by immune checkpoint inhibitors (ICIs) have been reported during clinical treatment. We aimed to explore the clinical characteristics of patients with ICIs-induced ITP under different therapeutic strategies based on the FAERS database and explore the potential biological mechanisms in combination with TCGA pan-cancer data. Data from FAERS were collected for ICIs adverse reactions between January 2012 and December 2022.

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The application of ChatGPTin the medical field has sparked debate regarding its accuracy. To address this issue, we present a Multi-Role ChatGPT Framework (MRCF), designed to improve ChatGPT's performance in medical data analysis by optimizing prompt words, integrating real-world data, and implementing quality control protocols. Compared to the singular ChatGPT model, MRCF significantly outperforms traditional manual analysis in interpreting medical data, exhibiting fewer random errors, higher accuracy, and better identification of incorrect information.

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Article Synopsis
  • The study investigates how cervical degeneration differs between healthy individuals with and without cervical flexion-relaxation phenomenon (FRP) and examines if the loss of FRP is connected to degeneration.
  • Healthy participants were categorized into normal and abnormal FRP groups, with MRI assessments utilized to analyze degeneration in both passive (like vertebrae and discs) and active (like neck muscles) systems.
  • Results indicated significant differences in cervical degeneration between the two groups, suggesting that a lack of FRP is associated with increased degeneration, supporting the idea that cervical FRP tests could help differentiate between healthy individuals and those with neck-related issues.
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Powassan virus (POWV) is a tick-borne flavivirus known for causing fatal neuroinvasive diseases in humans. Recently, there has been a noticeable increase in POWV infections, emphasizing the urgency of understanding viral replication, pathogenesis, and developing interventions. Notably, there are no approved vaccines or therapeutics for POWV, and its classification as a biosafety level-3 (BSL-3) agent hampers research.

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Article Synopsis
  • - Rheumatoid arthritis (RA) and primary Sjögren's syndrome (pSS) are common autoimmune diseases that often occur together, but their shared mechanisms are not fully understood.
  • - This study employed bioinformatic analyses to identify common genes, microRNAs, and potential therapeutic drugs associated with both diseases, focusing on gene co-expression patterns and public disease databases.
  • - Key findings included identifying four hub genes (CXCL10, GZMA, ITGA4, PSMB9) and suggesting 24 potential drugs, including some already known for treating RA and pSS, with hsa-mir-21 identified as a significant microRNA in their shared mechanisms.
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Article Synopsis
  • Colorectal cancer (CRC) is a complex disease with high mortality rates, and its link between genetic diversity within tumors and patient outcomes is not fully understood.
  • Using single-cell RNA sequencing (scRNA-seq) data, researchers identified different types of cells in CRC and analyzed their interactions to create a tumor cell differentiation trajectory.
  • They developed a prognostic model based on specific gene signatures that found high-risk patients have poorer survival outcomes and low chemotherapy responsiveness, indicating the model's effectiveness in predicting CRC prognosis and treatment evaluation.
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Background: Postoperative pain is one of the most common complications after surgery. In order to detect early and intervene in time for moderate to severe postoperative pain, it is necessary to identify risk factors and construct clinical prediction models. This study aimed to identify significant risk factors and establish a better-performing model to predict moderate to severe acute postoperative pain after orthopedic surgery under general anesthesia.

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Background: As Systemic Sclerosis (SSc) is a connective tissue ailment that impacts various bodily systems. The study aims to clarify the molecular subtypes of SSc, with the ultimate objective of establishing a diagnostic model that can inform clinical treatment decisions.

Methods: Five microarray datasets of SSc were retrieved from the GEO database.

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Rheumatoid arthritis (RA) is an autoimmune disease that exhibits a high degree of heterogeneity, marked by unpredictable disease flares and significant variations in the response to available treatments. The lack of optimal stratification for RA patients may be a contributing factor to the poor efficacy of current treatment options. The objective of this study is to elucidate the molecular characteristics of RA through the utilization of mitochondrial genes and subsequently construct and authenticate a diagnostic framework for RA.

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Article Synopsis
  • - A study investigated how the number of fused segments in the cervical spine affects the capability of cervical paravertebral muscles to relax during flexion, comparing outcomes of single-level versus multi-level anterior cervical discectomy and fusion (ACDF).
  • - Out of 115 patients, only those who underwent single-level ACDF showed significant recovery of the cervical flexion relaxation phenomenon (FRP) after 12 months, while patients with more levels fused (2 or more) showed minimal improvement.
  • - Results suggest that single-level ACDF is effective in normalizing the FRP, while the effectiveness decreases significantly with multi-level procedures, supporting the idea that the structure's passive nature plays an important role in recovery.
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Using bioinformatics analyses, this study aimed to identify lncRNAs related to the immune status of acute myeloid leukemia (AML) patients and ascertain the potential impact in immunity-related competing endogenous RNA (ceRNA) networks on AML prognosis. AML-related RNA-seq FPKM data, AML-related miRNA expression microarray data, and gene sets associated with immunity-related pathways were, respectively, obtained from the TCGA, GEO, and ImmReg databases. An immunity-related ceRNA network was then constructed according to the predicted interactions between AML-related mRNAs, lncRNAs, and miRNAs.

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Systemic lupus erythematosus (SLE) characterized by immune dysfunction is possibly more vulnerable to herpes simplex virus (HSV) infection. The infection has been intensively considered a common onset and exacerbation of SLE. This study is aimed at elucidating the causal association between SLE and HSV.

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Objective: To screen the prognostic biomarkers of metabolic genes in patients with multiple myeloma (MM), and construct a prognostic model of metabolic genes.

Methods: The histological database related to MM patients was searched. Data from MM patients and healthy controls with complete clinical information were selected for analysis.

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Background: One- and two-level osteotomies have been used to treat thoracolumbar kyphosis in patients with ankylosing spondylitis (AS). However, the effectiveness and safety of the 2 methods have not been systematically compared, and few studies have reported on which method might be more suitable for treating AS.

Methods: We performed a systematic literature search.

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Background: Head and neck squamous cell carcinoma (HNSCC) is among the most lethal and most prevalent malignant tumors. Glycolysis affects tumor growth, invasion, chemotherapy resistance, and the tumor microenvironment. Therefore, we aimed at identifying a glycolysis-related prognostic model for HNSCC and to analyze its relationship with tumor immune cell infiltrations.

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Background And Aims: Ulcerative colitis [UC] is a complex heterogeneous disease. This study aims to reveal the underlying molecular features of UC using genome-scale transcriptomes of patients with UC, and to develop and validate a novel stratification scheme.

Methods: A normalised compendium was created using colon tissue samples (455 patients with UC and 147 healthy controls [HCs]), covering genes from 10 microarray datasets.

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Cardiac ischemia, hypoxia, arrhythmias, and heart failure share the common electrophysiological changes featured by the elevation of intracellular Ca (Ca overload) and inhibition of the inward rectifier potassium (I ) channel. I channel agonists have been considered a new type of anti-arrhythmia and cardioprotective agents. We predicted using a drug repurposing strategy that tetramisole (Tet), a known anthelminthic agent, was a new I channel agonist.

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This study investigated the association between intestinal microbiota abundance and diversity and cluster of differentiation (CD)4 T cell subpopulations, cytokine levels, and disease activity in rheumatoid arthritis RA. A total of 108 rheumatoid arthritis (RA) patients and 99 healthy control (HC) subjects were recruited. PICRUSt2 was used for functional metagenomic predictions.

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