Publications by authors named "Patrick Slocombe"

Article Synopsis
  • Dkk family proteins, specifically Dkk4, play a crucial role in regulating Wnt signaling pathways, which are vital for various biological processes.
  • The study reveals the first atomic-resolution structure of Dkk4's N-terminal cysteine-rich domain (CRD1) and suggests significant evolutionary conservation and structural similarities between CRD1 and the C-terminal domain (CRD2).
  • The findings indicate that Dkk4 consists of two independent domains linked by a flexible region, and that CRD2 binds strongly to LRP6 and Kremen1, while the N-terminal region shows moderate binding to LRP6, highlighting the complex interactions that help to finely regulate Wnt signaling.
View Article and Find Full Text PDF

A number of proteins have been shown to modulate canonical Wnt signalling at the cell surface, including members of the Dickkopf (Dkk) family (Baron and Rawadi in J Endocrinol 148:2635-2643, 2007; Cruciat and Niehrs in Cold Spring Harb Perspect Biol 5:a015081, 2013). The Dkk family includes four secreted proteins (Dkk1-4), which are characterised by two highly conserved cysteine-rich regions corresponding to C24-C73 and C128-C201 in human Dkk4 (hDkk4). Here we report essentially complete backbone and comprehensive side chain (15)N, (13)C and (1)H NMR assignments for full length mature hDkk4 (M1-L207) containing a short C-terminal hexa-histidine tag (E208-H222).

View Article and Find Full Text PDF

LRP5 and LRP6 are proteins predicted to contain four six-bladed β-propeller domains and both bind the bone-specific Wnt signaling antagonist sclerostin. Here, we report the crystal structure of the amino-terminal region of LRP6 and using NMR show that the ability of sclerostin to bind to this molecule is mediated by the central core of sclerostin and does not involve the amino- and carboxyl-terminal flexible arm regions. We show that this structured core region interacts with LRP5 and LRP6 via an NXI motif (found in the sequence PNAIG) within a flexible loop region (loop 2) within the central core region.

View Article and Find Full Text PDF

The secreted glycoprotein sclerostin has recently emerged as a key negative regulator of Wnt signaling in bone and has stimulated considerable interest as a potential target for therapeutics designed to treat conditions associated with low bone mass, such as osteoporosis. We have determined the structure of sclerostin, which resulted in the identification of a previously unknown binding site for heparin, suggestive of a functional role in localizing sclerostin to the surface of target cells. We have also mapped the interaction site for an antibody that blocks the inhibition of Wnt signaling by sclerostin.

View Article and Find Full Text PDF

Chemokines are known to regulate the chemotaxis of leukocytes and play an important role in immunological processes. Chemokine receptors are widely distributed in hematopoietic cells and are often co-localized with the hematopoietic-specific G(16) and its close relative, G(14). Yet, many chemokine receptors utilize pertussis toxin-sensitive G(i) proteins for signaling.

View Article and Find Full Text PDF

The CHO-K1 cell line is commonly used for studies of recombinantly expressed proteins, including proteins of the G protein-coupled receptor (GPCR) family. This laboratory has used CHO-K1 cells for the functional characterization of Edg family GPCRs. However, parental CHO-K1 cells respond to lysophospholipids in in-vitro functional assays, which suggests expression of endogenous Edg family GPCRs.

View Article and Find Full Text PDF

Chemokines regulate the chemotaxis, development, and differentiation of many cell types enabling the regulation of routine immunosurveillance and immunological adaptation. CC chemokine receptor 1 (CCR1) is the target of 11 chemokines. This promiscuity of receptor-ligand interactions and the potential for functional redundancy has led us to investigate the selective activation of CCR1-coupled pathways by known CCR1 agonists.

View Article and Find Full Text PDF
Article Synopsis
  • ADAM family proteases are type I transmembrane proteins that play key roles in processing membrane-bound precursors and influencing cell interactions.
  • Soluble ADAM8 is an active metalloprotease capable of hydrolyzing specific proteins, but unlike other metalloproteinases, it is not inhibited by the typical tissue inhibitors of metalloproteinases (TIMPs).
  • ADAM9 also shows resistance to TIMP inhibition and can be inhibited by hydroxamate inhibitors, highlighting different regulatory mechanisms compared to other ADAM family members like ADAM10, 12, and 17.
View Article and Find Full Text PDF