Publications by authors named "Paroma Varma"

Electrophysiological signals exhibit both periodic and aperiodic properties. Periodic oscillations have been linked to numerous physiological, cognitive, behavioral and disease states. Emerging evidence demonstrates that the aperiodic component has putative physiological interpretations and that it dynamically changes with age, task demands and cognitive states.

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Background: The aortic valve is an important determinant of cardiovascular physiology and anatomic location of common human diseases.

Methods: From a sample of 34 287 white British ancestry participants, we estimated functional aortic valve area by planimetry from prospectively obtained cardiac magnetic resonance imaging sequences of the aortic valve. Aortic valve area measurements were submitted to genome-wide association testing, followed by polygenic risk scoring and phenome-wide screening, to identify genetic comorbidities.

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Visual knowledge bases such as Visual Genome power numerous applications in computer vision, including visual question answering and captioning, but suffer from sparse, incomplete relationships. All scene graph models to date are limited to training on a small set of visual relationships that have thousands of training labels each. Hiring human annotators is expensive, and using textual knowledge base completion methods are incompatible with visual data.

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As deep learning models are applied to increasingly diverse problems, a key bottleneck is gathering enough high-quality training labels tailored to each task. Users therefore turn to relying on imperfect sources of labels like pattern matching and user-defined heuristics. Unfortunately, users have to design these sources This process can be time consuming and expensive: domain experts often perform repetitive steps like guessing optimal numerical thresholds and developing informative text patterns.

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Biomedical repositories such as the UK Biobank provide increasing access to prospectively collected cardiac imaging, however these data are unlabeled, which creates barriers to their use in supervised machine learning. We develop a weakly supervised deep learning model for classification of aortic valve malformations using up to 4,000 unlabeled cardiac MRI sequences. Instead of requiring highly curated training data, weak supervision relies on noisy heuristics defined by domain experts to programmatically generate large-scale, imperfect training labels.

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Exploring the Utility of Developer Exhaust.

Proc Second Workshop Data Manag End End Mach Learn (2018)

June 2018

Using machine learning to analyze data often results in - code, logs, or metadata that do not define the learning algorithm but are byproducts of the data analytics pipeline. We study how the rich information present in developer exhaust can be used to approximately solve otherwise complex tasks. Specifically, we focus on using log data associated with training deep learning models to perform model search by performance metrics for untrained models.

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Training accurate classifiers requires many labels, but each label provides only limited information (one bit for binary classification). In this work, we propose BabbleLabble, a framework for training classifiers in which an annotator provides a natural language explanation for each labeling decision. A semantic parser converts these explanations into programmatic labeling functions that generate noisy labels for an arbitrary amount of unlabeled data, which is used to train a classifier.

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Obtaining enough labeled data to robustly train complex discriminative models is a major bottleneck in the machine learning pipeline. A popular solution is combining multiple sources of weak supervision using generative models. The structure of these models affects training label quality, but is difficult to learn without any ground truth labels.

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