Publications by authors named "Osamu Kotani"

No antiviral drugs currently are available for treatment of infection by hepatitis A virus (HAV), a causative agent of acute hepatitis, a potentially life-threatening disease. Chemical screening of a small-compound library using nanoluciferase-expressing HAV identified loxapine succinate, a selective dopamine receptor D2 antagonist, as a potent inhibitor of HAV propagation in vitro. Loxapine succinate did not inhibit viral entry nor internal ribosome entry site (IRES)-dependent translation, but exhibited strong inhibition of viral RNA replication.

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  • * Research in Thailand has shown that two genotypes of DENV2, Cosmopolitan and Asian-I, co-exist, and studies have investigated whether these genotypes differ in their ability to replicate and cause disease.
  • * Findings indicate that the Cosmopolitan genotype's structural proteins and non-structural proteins lead to larger viral replication and higher infection rates, suggesting these genetic differences impact the severity of dengue infections.
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The capsid of human immunodeficiency virus type 1 (HIV-1) forms a conical structure by assembling oligomers of capsid (CA) proteins and is a virion shell that encapsulates viral RNA. The inhibition of the CA function could be an appropriate target for suppression of HIV-1 replication because the CA proteins are highly conserved among many strains of HIV-1, and the drug targeting CA, lenacapavir, has been clinically developed by Gilead Sciences, Inc. Interface hydrophobic interactions between two CA molecules via the Trp184 and Met185 residues in the CA sequence are indispensable for conformational stabilization of the CA multimer.

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The HIV-1 capsid is a shell that encapsulates viral RNA, and forms a conical structure by assembling oligomers of capsid (CA) proteins. Since the CA proteins are highly conserved among many strains of HIV-1, the inhibition of the CA function could be an appropriate goal for suppression of HIV-1 replication, but to date, no drug targeting CA has been developed. Hydrophobic interactions between two CA molecules through Trp184 and Met185 in the protein are known to be indispensable for conformational stabilization of the CA multimer.

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Reverse transcriptase (RT) and integrase (IN) are encoded tandemly in the genes of retroviruses. We reported recently that HIV-1 RT and IN need to be supplied as the precursor intermediates, in which RT and IN are in fusion form (RTIN) to exert efficient reverse transcription in the context of HIV-1 replication. The mechanism underlying RTIN's effect, however, remains to be elucidated.

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  • - Lamellarin α 20-sulfate is a marine alkaloid that blocks the infection of human immunodeficiency virus type 1 and other enveloped RNA viruses like Ebola and SARS-CoV-2 by targeting their glycoproteins during the endocytosis process.
  • - Unlike similar substances, lamellarin does not inhibit the initial attachment of viral particles to cells, and its mechanism of action involves binding at a specific site on the Ebola virus glycoprotein that becomes more effective in acidic environments (pH 5.0).
  • - The study shows how lamellarin's unique properties and its ability to interact with viral proteins after the virus enters the cell could guide the development of new antiviral treatments to fight
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Plasma-membrane-specific localization of Gag, an essential step in HIV-1 particle assembly, is regulated by the interaction of the Gag MA domain with PI(4,5)P and tRNA-mediated inhibition of non-specific or premature membrane binding. Different tRNAs inhibit PI(4,5)P-independent membrane binding to varying degrees in vitro; however, the structural determinants for this difference remain unknown. Here we demonstrate that membrane binding of full-length Gag synthesized in vitro using reticulocyte lysates is inhibited when RNAs that contain the anticodon arm of tRNA, but not that of tRNA, are added exogenously.

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The stalk domain of influenza virus envelope glycoprotein hemagglutinin (HA) constitutes the axis connecting the head and transmembrane domains, and plays pivotal roles in conformational rearrangements of HA for virus infection. Here we characterized molecular interactions between the anti-HA stalk neutralization antibody F11 and influenza A(H1N1)pdm09 HA to understand the structural basis of the actions and modifications of this antibody. In silico structural analyses using a model of the trimeric HA ectodomain indicated that the F11 Fab fragment has physicochemical properties, allowing it to crosslink two HA monomers by binding to a region near the proteolytic cleavage site of the stalk domain.

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Molecular interactions of the variable envelope gp120 subunit of HIV-1 with two cellular receptors are the first step of viral infection, thereby playing pivotal roles in determining viral infectivity and cell tropism. However, the underlying regulatory mechanisms for interactions under gp120 spontaneous variations largely remain unknown. Here, we show an allosteric mechanism in which a single gp120 mutation remotely controls the ternary interactions between gp120 and its receptors for the switch of viral cell tropism.

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  • The HIV-1 virus incorporates its own RNA genome using a specific segment called the psi, found at the 5'-end of the viral genome.
  • A study compared psi sequences from two HIV-1 variants, subtype D and subtype B, discovering that subtype D has reduced packaging ability despite similar dimerization capabilities.
  • Further analysis revealed that two specific nucleotides (226 and 227) in the psi segment significantly affect the structural dynamics and efficiency of RNA packaging, indicating that these nucleotides act as regulators for packaging efficiency without influencing dimerization.
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The capsid of human immunodeficiency virus type 1 (HIV-1) is a shell that encloses viral RNA and is highly conserved among many strains of the virus. It forms a conical structure by assembling oligomers of capsid (CA) proteins. CA dysfunction is expected to be an important target of suppression of HIV-1 replication, and it is important to understand a new mechanism that could lead to the CA dysfunction.

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  • IgA antibodies, specifically secretory IgA (SIgA), are crucial in preventing influenza virus infections and their functionality varies based on their structural forms, such as monomeric or polymeric IgA.
  • A study highlighted the complex relationships between anti-HA stalk-binding IgA antibodies and their functional effectiveness, indicating that IgA polymerization can either enhance or diminish anti-viral activities depending on the mode of binding to the HA stalk and receptor binding site.
  • The overall findings suggest that the interactions between different binding mechanisms of IgA antibodies significantly influence their ability to combat influenza, highlighting the importance of understanding these dynamics in antibody function.
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Coxsackievirus B (CVB) causes severe morbidity and mortality in neonates and is sometimes associated with severe brain damage resulting from acute severe viral encephalomyelitis. However, the neuropathology of CVB infection remains unclear. A prototype strain of coxsackievirus B2 (Ohio-1) induces brain lesions in neonatal mice, resulting in dome-shaped heads, ventriculomegaly, and loss of the cerebral cortex.

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The retroviral Gag capsid (Gag-CA) interdomain linker is an unstructured peptide segment connecting structured N-terminal and C-terminal domains. Although the region is reported to play roles in virion morphogenesis and infectivity, underlying molecular mechanisms remain unexplored. To address this issue, we determined biological and molecular phenotypes of HIV-1 CA linker mutants by experimental and approaches.

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HIV-1 Env protein functions in the entry process and is the target of neutralizing antibodies. Its intrinsically high mutation rate is certainly one of driving forces for persistence/survival in hosts. For optimal replication in various environments, HIV-1 Env must continue to adapt and evolve through balancing sometimes incompatible function, replication fitness, and neutralization sensitivity.

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  • MERS-CoV infection can cause various levels of illness, including mild symptoms to severe pneumonia and death, making it a significant public health concern.
  • Researchers developed transgenic mice that express a human receptor (hDPP4) to study MERS-CoV, revealing an expression profile similar to that in human kidneys and lungs.
  • Infection of these mice showed age-related differences in immune response, indicating that the new mouse model can help deepen understanding of MERS-CoV pathology and develop potential treatments.
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Enterovirus 71 (EV71) is a causative agent of hand, foot, and mouth disease and sometimes causes severe or fatal neurological complications. The amino acid at VP1-145 determines the virological characteristics of EV71. Viruses with glutamic acid (E) at VP1-145 (VP1-145E) are virulent in neonatal mice and transgenic mice expressing human scavenger receptor B2, whereas those with glutamine (Q) or glycine (G) are not.

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  • Researchers identified an anti-influenza compound, DP2392-E10, that inhibits the viral nucleoprotein's nuclear export, showing effectiveness against various influenza A subtypes.
  • DP2392-E10 works by blocking the nuclear export of both the viral nucleoprotein and NEP, essential for virus replication.
  • The compound binds to the cellular protein CRM1, crucial for nuclear export, suggesting CRM1 as a target for new antiviral drug development.
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Saffold virus (SAFV), a human cardiovirus, is occasionally detected in infants with neurological disorders, including meningitis and cerebellitis. We recently reported that SAFV type 3 isolates infect cerebellar glial cells, but not large neurons, in mice. However, the impact of this infection remained unclear.

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Objective: Saffold virus (SAFV), a picornavirus, is occasionally detected in children with acute flaccid paralysis, meningitis, and cerebellitis; however, the neuropathogenicity of SAFV remains undetermined.

Methods: The virulence of two clinical isolates of SAFV type 3 (SAFV-3) obtained from a patient with aseptic meningitis (AM strain) and acute upper respiratory inflammation (UR strain) was analyzed in neonatal and young mice utilizing virological, pathological, and immunological methods.

Results: The polyproteins of the strains differed in eight amino acids.

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Enterovirus 71 (EV71), a major causative agent of hand, foot, and mouth disease, occasionally causes severe neurological symptoms. We identified P-selectin glycoprotein ligand-1 (PSGL-1) as an EV71 receptor and found that an amino acid residue 145 in the capsid protein VP1 (VP1-145) defined PSGL-1-binding (PB) and PSGL-1-nonbinding (non-PB) phenotypes of EV71. However, the role of PSGL-1-dependent EV71 replication in neuropathogenesis remains poorly understood.

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The aim of this study was to establish a reliable method of virus detection for the diagnosis of critical enterovirus infections such as acute infective encephalitis, encephalomyelitis and myocarditis. Because histopathological and immunohistochemical analyses of paraffin-embedded tissues play an important role in recognizing infectious agents in tissue samples, six in-house polyclonal antibodies raised against three representative enteroviruses using an indirect immunofluorescence assay and immunohistochemistry were examined. This panel of polyclonal antibodies recognized three serotypes of enterovirus.

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A mouse-adapted porcine epidemic diarrhea virus, MK-p10, showed higher neurovirulence in suckling mice than a non-adapted MK strain. There was no difference in virus growth, whereas clear differences between these two virus infections existed in the type of target cells infected, the spread of virus and the cytokine levels produced in the brain. In the early phase of infection, neurons, astrocytes and neural progenitor cells were infected by MK-p10, whereas neural progenitor cells were the only target cells infected by MK.

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