Generalized three-dimensional lattice Boltzmann color-gradient method for immiscible two-phase pore-scale imbibition and drainage in porous media.

This article presents a three-dimensional numerical framework for the simulation of fluid-fluid immiscible compounds in complex geometries, based on the multiple-relaxation-time lattice Boltzmann method to model the fluid dynamics and the color-gradient approach to model multicomponent flow interaction. New lattice weights for the lattices D3Q15, D3Q19, and D3Q27 that improve the Galilean invariance of the color-gradient model as well as for modeling the interfacial tension are derived and provided in the Appendix. The presented method proposes in particular an approach to model the interaction between the fluid compound and the solid, and to maintain a precise contact angle between the two-component interface and the wall.

The mechanical properties of a cell-based numerical model of epithelium.

In this work we use a computational cell-based model to study the influence of the mechanical properties of cells on the mechanics of epithelial tissues. We analyze the effect of the model parameters on the elasticity and the mechanical response of tissues subjected to stress loading application. We compare our numerical results with experimental measurements of epithelial cell monolayer mechanics.

Determination of a shear rate threshold for thrombus formation in intracranial aneurysms.

Background: Particular intra-aneurysmal blood flow conditions, created naturally by the growth of an aneurysm or induced artificially by implantation of a flow diverter stent (FDS), can potentiate intra-aneurysmal thrombosis. The aim of this study was to identify hemodynamic indicators, relevant to this process, which could be used as a prediction of the success of a preventive endovascular treatment.

Method: A cross sectional study on 21 patients was carried out to investigate the possible association between intra-aneurysmal spontaneous thrombus volume and the dome to neck aspect ratio (AR) of the aneurysm.

Noise source identification with the lattice Boltzmann method.

In this paper the sound source identification problem is addressed with the use of the lattice Boltzmann method. To this aim, a time-reversed problem coupled to a complex differentiation method is used. In order to circumvent the inherent instability of the time-reversed lattice Boltzmann scheme, a method based on a split of the lattice Boltzmann equation into a mean and a perturbation component is used.

Estimating allele age and selection coefficient from time-serial data.

Recent advances in sequencing technologies have made available an ever-increasing amount of ancient genomic data. In particular, it is now possible to target specific single nucleotide polymorphisms in several samples at different time points. Such time-series data are also available in the context of experimental or viral evolution.

Towards a physical interpretation of the entropic lattice Boltzmann method.

The entropic lattice Boltzmann method (ELBM) is one among several different versions of the lattice Boltzmann method for the simulation of hydrodynamics. The collision term of the ELBM is characterized by a nonincreasing H function, guaranteed by a variable relaxation time. We propose here an analysis of the ELBM using the Chapman-Enskog expansion.

Straight velocity boundaries in the lattice Boltzmann method.

Various ways of implementing boundary conditions for the numerical solution of the Navier-Stokes equations by a lattice Boltzmann method are discussed. Five commonly adopted approaches are reviewed, analyzed, and compared, including local and nonlocal methods. The discussion is restricted to velocity Dirichlet boundary conditions, and to straight on-lattice boundaries which are aligned with the horizontal and vertical lattice directions.