NLM-Gene, a richly annotated gold standard dataset for gene entities that addresses ambiguity and multi-species gene recognition.

The automatic recognition of gene names and their corresponding database identifiers in biomedical text is an important first step for many downstream text-mining applications. While current methods for tagging gene entities have been developed for biomedical literature, their performance on species other than human is substantially lower due to the lack of annotation data. We therefore present the NLM-Gene corpus, a high-quality manually annotated corpus for genes developed at the US National Library of Medicine (NLM), covering ambiguous gene names, with an average of 29 gene mentions (10 unique identifiers) per document, and a broader representation of different species (including Homo sapiens, Mus musculus, Rattus norvegicus, Drosophila melanogaster, Arabidopsis thaliana, Danio rerio, etc.

Tumor necrosis factor-alpha stimulates ICAM-1 expression in human vascular smooth muscle cells.

Human atherosclerotic plaques contain numerous smooth muscle cells (SMCs) that express intercellular adhesion molecule-1 (ICAM-1). Expression of ICAM-1 in different cells is known to be regulated by tumor necrosis factor-alpha (TNF-alpha), which has recently been found to be present in the intimal thickening of human arteries. Therefore, we studied the effect of TNF-alpha on ICAM-1 mRNA content and surface expression in cultured human aortic SMCs by using the methods of Northern blotting and immunofluorescence flow cytometry.

[Connective tissue pathology in patients with aneurysms of the cerebral arteries (Ehlers-Danlos syndrome)].

Results of morphological examination of the skin and vessels in patients with large and giant brain artery aneurysms are presented. Ehlers-Danlos syndrome (type IV) was diagnosed in half of the cases; very thin skin and vessel walls, the disturbance of the collagen fibril structure in dermis, increased permeability and the tendency to rupture of the inner elastic membrane of brain arteries combined with a severe intimal atrophy. The absence of the III type collagen in the skin biopsies was shown immunohistochemically.

Proliferative response of smooth muscle cells in hypertension.

A significant increase (up to 20% from about 10% in normals) in the number of smooth muscle cells (SMC) with tetraploid DNA content was found in the media and intima of human hypertensive aorta. A similar process was detected during normal human vessel aging. It was found that SMC from normal human aorta and normotensive rat aorta, which were able to incorporate 3H-thymidine, had diminished proliferative potency and a tendency to polyploidization in primary culture.