Publications by authors named "Noriko Tanabe"

Article Synopsis
  • This study evaluated the effectiveness of comprehensive genomic profiling (CGP) in metastatic colorectal cancer (mCRC) using real-world data from Saitama Medical Center between 2020 and 2023.
  • Out of 43 enrolled patients, only 14% received CGP-based therapy, with a median overall survival of 9.7 months for those patients.
  • The results indicate that CGP may have potential in guiding treatment for mCRC, as one patient showed a significant response to pembrolizumab after CGP revealed a high tumor mutational burden despite initial classifications.
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Aim: Although BRCA1/2 is most frequently associated with hereditary breast and ovarian cancer (HBOC), many other related genes have been implicated. Therefore, we investigated the prevalence of non-BRCA1/2 genes associated with hereditary cancer predisposition in BRCA1/2-negative patients from the Department of Genetic Medicine and Services with breast and ovarian cancer using a multi-gene panel (MGP) analysis.

Methods: We conducted a retrospective MGP analysis (National Cancer Center Onco-Panel for Familial Cancer; NOP_FC) in BRCA1/2-negative patients with breast, ovarian, and overlapping breast/ovarian cancers who visited our genetic counseling between April 2004 and October 2022.

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  • A new model for predicting germline pathogenic variants (GPVs) of the APC gene in patients with adenomatous polyposis is being developed to aid in clinical diagnosis and management, especially when genetic testing is unavailable.
  • In a study of 162 patients, 55.6% were found to have GPVs of the APC gene, with key predictors identified, including age under 40, 100 or more polyps, fundic gland polyposis, and a family history of colorectal polyposis.
  • The predictive model demonstrated high accuracy (area under the curve of 0.91) and aims to assist both patients and healthcare providers in deciding on the necessity of genetic testing.
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Purpose: This retrospective study was performed to investigate the recent trend of occurrence of cancer of the remnant colorectal segment(RCRS)after ileal-pouch anal anastomosis(IPAA)/ileorectal anastomosis(IRA)and to consider the optimal surveillance methods in patients with familial adenomatous polyposis(FAP)undergoing(procto)colectomy.

Patients And Methods: The subject was a total of patients with FAP undergoing IPAA or IRA between 2005 and 2022. Clinicopathological data were extracted from medical charts and analyzed.

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  • Innovations in sequencing technology have improved the detection of genetic mutations related to inherited diseases, yet many patients remain undiagnosed due to limitations in current methods.
  • The study introduces a new computational workflow for target adaptive sampling long-read sequencing (TAS-LRS) that enhances diagnostic accuracy by effectively identifying both single nucleotide variants and complex structural variations.
  • The TAS-LRS method not only discovered new mutations related to familial adenomatous polyposis and Lynch syndrome but also demonstrated the potential to analyze off-target reads for comprehensive genetic risk assessments.
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A 47-year-old woman diagnosed with transverse colon cancer with liver, peritoneal, and lymph node metastases was admitted. Modified FOLFOX6(mFOLFOX6)regimen was given as a first line chemotherapy and was followed by pembrolizumab after 1 cycle of the mFOLFOX6, because microsatellite instability(MSI)test of the tumor showed high-frequency MSI. Because of the transverse colon obstruction after 2 cycles of pembrolizumab, she underwent right hemicolectomy.

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Introduction: Since May 2019, comprehensive genomic profiling (CGP) has been covered by Japan's health insurance system for patients with solid tumours that have progressed on standard chemotherapy, rare tumours or tumours of unknown primary origin. Although CGP has the potential to identify actionable mutations that can guide the selection of genomically matched therapies for patients with advanced cancer and limited treatment options, less than 10% of patients benefit from CGP testing, which may have a negative impact on patients' mental status. The aim of this study is to investigate the prevalence of psychological distress and associated factors among patients with advanced cancer who are undergoing CGP testing across Japan.

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Unlabelled: Cancer genome profiling (CGP) occasionally identifies pathogenic germline variants (PGV) in cancer susceptibility genes (CSG) as secondary findings. Here, we analyzed the prevalence and clinical characteristics of PGVs based on nationwide real-world data from CGP tests in Japan. We analyzed the genomic information and clinical characteristics of 23,928 patients with solid cancers who underwent either tumor-only (n = 20,189) or paired tumor-normal (n = 3,739) sequencing CGP tests between June 2019 and December 2021 using the comprehensive national database.

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Background: There has been increasing interest into the role of germline BRCA1/2 pathogenic variants (gBRCA PV) and gATM PV and likely PV (PV and LPV; PV + LPV) in the carcinogenesis and treatment of pancreatic cancer (PC), but the clinical features have not been well described.

Methods: Patients with confirmed gBRCA PV and gATM PV + LPV PC treated at our hospital between April 2016 and December 2021, were retrospectively evaluated for clinical characteristics and outcomes.

Results: Twenty-two patients harbored gBRCA PV and three patients harbored gATM PV + LPV.

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Article Synopsis
  • Genetic testing methods like sequencing analysis and MLPA are typically used to diagnose familial adenomatous polyposis (FAP), but some genetic changes can be hard to detect.
  • A case study of a woman with FAP showed that complex genomic rearrangements could be identified through advanced techniques such as multigene panel testing, chromosomal analysis, and long-read sequencing.
  • The study highlights the importance of using comprehensive genomic analyses when standard testing fails to find genetic variants, especially in patients with a relevant medical or family history of hereditary cancer syndromes.
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  • This study aimed to identify genetic changes and potential treatment targets in advanced pediatric solid tumors through genomic profiling.
  • Conducted at the National Cancer Center in Japan, it analyzed tumor and blood samples from 142 pediatric patients with recurrent or refractory cancer, finding significant genetic alterations in 59% of those evaluable.
  • The research highlights the importance of genomic medicine in understanding tumor biology and developing new therapies, while also noting challenges in accessibility and a limited number of actionable treatment options.
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Precision medicine is rapidly changing the diagnostic and treatment spectrum of oncology. In May 2019, comprehensive genomic profiling (CGP) (somatic and/or germline) was approved for reimbursement in Japan. While the promise of novel and targeted therapies has elevated hopes for the benefits of CGP, the lack of relevant genomic findings and/or limited access to relevant therapies remain important themes in this field.

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Background And Aims: In familial adenomatous polyposis (FAP), neoplastic lesions outside the colon have become increasingly important. The genotype-phenotype correlation has been established for duodenal polyps, and regular screening is recommended. However, this correlation remains unclear for small-intestinal lesions, except for reports on the relationship between their occurrence and Spigelman stage.

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  • Gastric foveolar-type adenoma (FA) is a rare, benign tumor occurring in the stomach, either randomly or in patients with familial adenomatous polyposis (FAP), but the molecular differences between these cases are not well understood.
  • In a study analyzing 48 total FAs (18 sporadic and 30 from FAP patients), researchers discovered two subtypes of sporadic FA - flat and raspberry-like, with distinct endoscopic features and varying sizes.
  • Genetic analysis revealed that both flat sporadic FAs and FAP-associated FAs frequently exhibited mutations in APC and KRAS genes, suggesting that flat FA is the sporadic equivalent of FAP-associated FA.
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In , gustatory receptor neurons (GRNs) for sugar taste coexpress various combinations of gustatory receptor () genes and are found in multiple sites in the body. To determine whether diverse sugar GRNs expressing different combinations of s have distinct behavioral roles, we examined the effects on feeding behavior of genetic manipulations which promote or suppress functions of GRNs that express either or both of the sugar receptor genes (+ GRNs) and (+ GRNs). Cell-population-specific overexpression of the wild-type form of ( ) in the mutant background revealed that + GRNs localized on the legs and internal mouthpart critically contribute to food choice but not to meal size decisions, while + GRNs, which are broadly expressed in many sugar-responsive cells across the body with an enrichment in the labella, are involved in both food choice and meal size decisions.

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Background/purpose: Pancreatic and biliary tract cancers are one of the Lynch syndrome-associated malignancies. There are few reports describing the patients' backgrounds and clinical characteristics.

Methods: We retrospectively reviewed the medical records of patients with Lynch syndrome-associated pancreatic or biliary tract malignant tumors at National Cancer Center Hospital between March 1992 and October 2019.

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Background: Muir-Torre syndrome (MTS), which accounts for a small subset (1-3 %) of Lynch syndrome (LS), is an autosomal dominant genetic disorder characterized by sebaceous gland or keratoacanthoma associated with visceral malignancies. Most families with MTS have pathogenic germline variants (PGV) in MSH2. Sarcomas are not common on the LS tumor spectrum, and sarcomas associated with MTS are extremely rare.

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Background: Although gastric cancer is one of the Lynch syndrome (LS)-related tumors, the clinicopathological features of gastric cancer in patients with LS remain uncertain. To investigate the incidence risk and clinicopathological features of gastric neoplasms in LS, we conducted a retrospective cohort study in Japanese LS patients.

Methods: LS patients with pathogenic mismatch repair (MMR) gene variants were extracted from the LS registry of the National Cancer Center Hospital, Japan.

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Colorectal carcinogenesis in familial adenomatous polyposis (FAP) follows a conventional adenoma-carcinoma sequence. However, previous studies have also reported the occurrence of traditional serrated adenomas (TSAs) in patients with FAP. In the present study, we analyzed the clinicopathologic and molecular features of 37 TSAs from 21 FAP patients.

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Poly(2-methoxyethyl acrylate) (PMEA) shows excellent blood compatibility because of the existence of intermediate water. Various modifications of PMEA by changing its main or side chain's chemical structure allowed tuning of the water content and the blood compatibility of numerous novel polymers. Here, we exploit a possibility of manipulating the surface hydration structure of PMEA by incorporation of small amounts of hydrophobic fluorine groups in MEA polymers using atom-transfer radical polymerization and the (macro) initiator concept.

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Next-generation sequencing (NGS) of tumor tissue (ie, clinical sequencing) can guide clinical management by providing information about actionable gene aberrations that have diagnostic and therapeutic significance. Here, we undertook a hospital-based prospective study (TOP-GEAR project, 2nd stage) to investigate the feasibility and utility of NGS-based analysis of 114 cancer-associated genes (the NCC Oncopanel test). We examined 230 cases (comprising more than 30 tumor types) of advanced solid tumors, all of which were matched with nontumor samples.

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In the collaborative research to support genomic medicine, we aim to improve the efficiency of operation such as prevention of hereditary cancer syndromes. In the present work, we built a prototype system to record a pedigree chart, clinical and genetic information on individuals during a genetic counseling session. In a mock examination, we were able to draw the pedigree chart of four generations in about four minutes and to record necessary information without disrupting conversation with counselees.

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Mesenchymal stem cells (MSCs) have various functions, making a significant contribution to tissue repair. On the other hand, the viability and function of MSCs are not lasting after an in vivo transplant, and the therapeutic effects of MSCs are limited. Although various chemical modification methods have been applied to MSCs to improve their viability and function, most of conventional drug modification methods are short-term and unstable and cause cytotoxicity.

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The origin and spread of novel agronomic traits during crop domestication are complex events in plant evolution. Wild rice (Oryza rufipogon) has red grains due to the accumulation of proanthocyanidins, whereas most cultivated rice (Oryza sativa) varieties have white grains induced by a defective allele in the Rc basic helix-loop-helix (bHLH) gene. Although the events surrounding the origin and spread of black rice traits remain unknown, varieties with black grains due to anthocyanin accumulation are distributed in various locations throughout Asia.

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