Quantum mechanical/molecular mechanics (QM/MM) calculations were performed on the neutral, anionic, and dianionic forms of Pheophytin-a (Pheo-a) in N,N-dimethyl formamide (DMF) in order to calculate the absolute free energy of reduction of Pheo-a in solution. The geometry of the solvated species was optimized by restricted open-shell density functional treatment (ROB3LYP) using the 6-31G(d) basis set for the molecular species while the primary solvent shell consisting of 45 DMF molecules was treated by the MM method using the universal force field (UFF). Electronic energies of the neutral, anionic, and dianionic species were obtained by carrying out single point density functional theory (DFT) calculations using the 6-311+G(2d,2p) basis set on the respective ONIOM optimized geometries.
View Article and Find Full Text PDFA physicochemical interpretation of a recently formulated temperature-dependent, steady-state rate expression for the production of glucose equivalent in C(4) plants is given here. We show that the rate equation is applicable to a wide range of C(4) plants.
View Article and Find Full Text PDFWe prepare a temperature-dependent formulation of the integrated kinetics for the overall process of photosynthesis in eukaryotic cells. To avoid complexity, the C4 plants are chosen because their rate of photosynthesis is independent of the partial pressure of O2. A systematically simplified but comprehensive scheme for both light and dark reactions is considered.
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