Study Objectives: Wearable sleep-tracker devices are ubiquitously used to measure sleep; however, the estimated sleep parameters often differ from the gold-standard polysomnography (PSG). It is unclear to what extent we can tolerate these errors within the context of a particular clinical or operational application. Here, we sought to develop a method to quantitatively determine whether a sleep tracker yields acceptable sleep-parameter estimates for assessing alertness impairment.
View Article and Find Full Text PDFTo be effective as a key component of fatigue-management systems, biomathematical models that predict alertness impairment as a function of time of day, sleep history, and caffeine consumption must demonstrate the ability to make accurate predictions across a range of sleep-loss and caffeine schedules. Here, we assessed the ability of the previously reported unified model of performance (UMP) to predict alertness impairment at the group-average and individualised levels in a comprehensive set of 12 studies, including 22 sleep and caffeine conditions, for a total of 301 unique subjects. Given sleep and caffeine schedules, the UMP predicted alertness impairment based on the psychomotor vigilance test (PVT) for the duration of the schedule.
View Article and Find Full Text PDFWe report on the results of a molecular dynamics simulation study of porous glassy media, formed in the process of isochoric rapid quenching from a high-temperature liquid state. The transition to a porous solid occurs due to the concurrent processes of phase separation and material solidification. The study is focused on topographies of the model porous structures and their dependence on temperature and average density.
View Article and Find Full Text PDFMolecular dynamics simulations are carried out to investigate mechanical properties and porous structure of binary glasses subjected to steady shear. The model vitreous systems were prepared via thermal quench at constant volume to a temperature well below the glass transition. The quiescent samples are characterized by a relatively narrow pore size distribution whose mean size is larger at lower glass densities.
View Article and Find Full Text PDFMolecular dynamics simulations are used to investigate the rate and temperature dependence of the slip length in thin liquid films confined by smooth, thermal substrates. In our setup, the heat generated in a force-driven flow is removed by the thermostat applied on several wall layers away from liquid-solid interfaces. We found that for both high and low wall-fluid interaction (WFI) energies, the temperature of the fluid phase rises significantly as the shear rate increases.
View Article and Find Full Text PDFThe diffusion of a Janus rod-shaped nanoparticle in a dense Lennard-Jones fluid is studied using molecular dynamics (MD) simulations. The Janus particle is modeled as a rigid cylinder whose atoms at each end have different interaction energies with fluid molecules, thus comprising wetting and nonwetting surfaces. We found that both rotational and translational diffusion coefficients are larger for Janus particles with lower average wettability, and these values are bound between the two limiting cases of uniformly wetting and nonwetting particles.
View Article and Find Full Text PDFUsing molecular dynamics simulations, we study the transient response of a binary Lennard-Jones glass subjected to periodic shear deformation. The amorphous solid is modeled as a three-dimensional Kob-Andersen binary mixture at a low temperature. The cyclic loading is applied to slowly annealed, quiescent samples, which induces irreversible particle rearrangements at large strain amplitudes, leading to stress-strain hysteresis and a drift of the potential energy towards higher values.
View Article and Find Full Text PDFThe slip behavior of simple fluids over atomically smooth surfaces was investigated in a wide range of wall-fluid interaction (WFI) energies at low shear rates using non-equilibrium molecular dynamics simulations. The relationship between slip and WFI shows two regimes (the strong-WFI and weak-WFI regimes): as WFI decreases, the slip length increases in the strong-WFI regime and decreases in the weak-WFI regime. The critical value of WFI energy that separates these regimes increases with temperature, but it remains unaffected by the driving force.
View Article and Find Full Text PDFThe influence of periodic shear deformation on nonaffine atomic displacements in an amorphous solid is examined via molecular dynamics simulations. We study the three-dimensional Kob-Andersen binary mixture model at a finite temperature. It is found that when the material is periodically strained, most of the atoms undergo repetitive nonaffine displacements with amplitudes that are broadly distributed.
View Article and Find Full Text PDFPhys Rev E
January 2016
The effect of oscillatory shear strain on nonaffine rearrangements of individual particles in a three-dimensional binary glass is investigated using molecular dynamics simulations. The amorphous material is represented by the Kob-Andersen mixture at the temperature well below the glass transition. We find that during periodic shear deformation of the material, some particles undergo reversible nonaffine displacements with amplitudes that are approximately power-law distributed.
View Article and Find Full Text PDFJ Phys Condens Matter
November 2015
Langevin dynamics simulations are performed to investigate the plastic response of a model glass to a local shear transformation in a quiescent system. The deformation of the material is induced by a spherical inclusion that is gradually strained into an ellipsoid of the same volume and then reverted back into the sphere. We show that the number of cage-breaking events increases with increasing strain amplitude of the shear transformation.
View Article and Find Full Text PDFMolecular dynamics simulations are carried out to study the translational and rotational diffusion of a single Janus particle immersed in a dense Lennard-Jones fluid. We consider a spherical particle with two hemispheres of different wettabilities. The analysis of the particle dynamics is based on the time-dependent orientation tensor, particle displacement, as well as the translational and angular velocity autocorrelation functions.
View Article and Find Full Text PDFPhys Rev E Stat Nonlin Soft Matter Phys
March 2015
The effect of a local shear transformation on plastic deformation of a three-dimensional amorphous solid is studied using molecular dynamics simulations. We consider a spherical inclusion, which is gradually transformed into an ellipsoid of the same volume and then converted back into the sphere. It is shown that at sufficiently large strain amplitudes, the deformation of the material involves localized plastic events that are identified based on the relative displacement of atoms before and after the shear transformation.
View Article and Find Full Text PDFPhys Rev E Stat Nonlin Soft Matter Phys
January 2014
The dynamics of structural relaxation in a model polymer glass subject to spatially homogeneous, time-periodic shear deformation is investigated using molecular dynamics simulations. We study a coarse-grained bead-spring model of short polymer chains below the glass transition temperature. It is found that at small strain amplitudes, the segmental dynamics is nearly reversible over about 10^{4} cycles, while at strain amplitudes above a few percent, polymer chains become fully relaxed after a hundred cycles.
View Article and Find Full Text PDFPhys Rev E Stat Nonlin Soft Matter Phys
May 2013
Molecular dynamics simulations are performed to investigate heterogeneous dynamics in amorphous glassy materials under oscillatory shear strain. We consider three-dimensional binary Lennard-Jones mixture well below the glass transition temperature. The structural relaxation and dynamical heterogeneity are quantified by means of the self-overlap order parameter and the dynamic susceptibility.
View Article and Find Full Text PDFThe results obtained from molecular dynamics simulations of the friction at an interface between polymer melts and weakly attractive crystalline surfaces are reported. We consider a coarse-grained bead-spring model of linear chains with adjustable intrinsic stiffness. The structure and relaxation dynamics of polymer chains near interfaces are quantified by the radius of gyration and decay of the time autocorrelation function of the first normal mode.
View Article and Find Full Text PDFThe influence of periodic and random surface textures on the flow structure and effective slip length in Newtonian fluids is investigated by molecular dynamics (MD) simulations. We consider a situation where the typical pattern size is smaller than the channel height and the local boundary conditions at wetting and nonwetting regions are characterized by finite slip lengths. In the case of anisotropic patterns, transverse flow profiles are reported for flows over alternating stripes of different wettability when the shear flow direction is misaligned with respect to the stripe orientation.
View Article and Find Full Text PDFPhys Rev E Stat Nonlin Soft Matter Phys
November 2010
The molecular mechanism of slip at the interface between polymer melts and weakly attractive smooth surfaces is investigated using molecular dynamics simulations. In agreement with our previous studies on slip flow of shear-thinning fluids, it is shown that the slip length passes through a local minimum at low shear rates and then increases rapidly at higher shear rates. We found that at sufficiently high shear rates, the slip flow over atomically flat crystalline surfaces is anisotropic.
View Article and Find Full Text PDFPhys Rev E Stat Nonlin Soft Matter Phys
January 2010
Molecular dynamics (MD) and continuum simulations are carried out to investigate the influence of shear rate and surface roughness on slip flow of a Newtonian fluid. For weak wall-fluid interaction energy, the nonlinear shear-rate dependence of the intrinsic slip length in the flow over an atomically flat surface is computed by MD simulations. We describe laminar flow away from a curved boundary by means of the effective slip length defined with respect to the mean height of the surface roughness.
View Article and Find Full Text PDFPhys Rev E Stat Nonlin Soft Matter Phys
September 2009
The shear rate dependence of the slip length in thin polymer films confined between atomically flat surfaces is investigated by molecular dynamics simulations. The polymer melt is described by the bead-spring model of linear flexible chains. We found that at low shear rates the velocity profiles acquire a pronounced curvature near the wall and the absolute value of the negative slip length is approximately equal to the thickness of the viscous interfacial layer.
View Article and Find Full Text PDFThe slip phenomena in thin polymer films confined by either flat or periodically corrugated surfaces are investigated by molecular dynamics and continuum simulations. For atomically flat surfaces and weak wall-fluid interactions, the shear rate dependence of the slip length has a distinct local minimum which is followed by a rapid increase at higher shear rates. For corrugated surfaces with wavelength larger than the radius of gyration of polymer chains, the effective slip length decays monotonically with increasing corrugation amplitude.
View Article and Find Full Text PDFPhys Rev E Stat Nonlin Soft Matter Phys
April 2008
Molecular dynamics simulations are carried out to investigate the dynamic behavior of the slip length in thin polymer films confined between atomically smooth thermal surfaces. For weak wall-fluid interactions, the shear rate dependence of the slip length acquires a distinct local minimum followed by a rapid growth at higher shear rates. With increasing fluid density, the position of the local minimum is shifted to lower shear rates.
View Article and Find Full Text PDFMolecular dynamics simulations are used to investigate the influence of molecular-scale surface roughness on the slip behavior in thin liquid films. The slip length increases almost linearly with the shear rate for atomically smooth rigid walls and incommensurate structures of the liquid/solid interface. The thermal fluctuations of the wall atoms lead to an effective surface roughness, which makes the slip length weakly dependent on the shear rate.
View Article and Find Full Text PDFPhys Rev E Stat Nonlin Soft Matter Phys
May 2007
The dynamic behavior of the slip length in a fluid flow confined between atomically smooth surfaces is investigated using molecular dynamics simulations. At weak wall-fluid interactions, the slip length increases nonlinearly with the shear rate provided that the liquid/solid interface forms incommensurable structures. A gradual transition to the linear rate dependence is observed upon increasing the wall-fluid interaction.
View Article and Find Full Text PDFPhys Rev E Stat Nonlin Soft Matter Phys
April 2005
We investigate the behavior of the slip length in Newtonian liquids subject to planar shear bounded by substrates with mixed boundary conditions. The upper wall, consisting of a homogenous surface of finite or vanishing slip, moves at a constant speed parallel to a lower stationary wall, whose surface is patterned with an array of stripes representing alternating regions of no shear and finite or no slip. Velocity fields and effective slip lengths are computed both from molecular dynamics (MD) simulations and solution of the Stokes equation for flow configurations either parallel or perpendicular to the stripes.
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