Publications by authors named "Niedzwiedzki D"

Excitation energy transfer between the photochemically active protein complexes is key for photosynthetic processes. Phototrophic organisms like cyanobacteria experience subtle changes in irradiance under natural conditions. Such changes need adjustments to the excitation energy transfer between the photosystems for sustainable growth.

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Photosystem II (PSII) splits water in oxygenic photosynthesis on Earth. The structure and function of the CSM-type PSII-LHCII (light-harvesting complex II) megacomplexes from the wild-type and PsbR-deletion mutant plants are studied through electron microscopy (EM), structural mass spectrometry, and ultrafast fluorescence spectroscopy [time-resolved fluorescence (TRF)]. The cryo-EM structure of a type I CSM megacomplex demonstrates that the three domains of PsbR bind to the stromal side of D1, D2, and CP43; associate with the single transmembrane helix of the redox active Cyt ; and stabilize the luminal extrinsic PsbP, respectively.

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Article Synopsis
  • * In the study, researchers deleted a part of the protein subunit ApcE (specifically the linker domain LD3) which led to a mutated PBS structure with a bicylindrical core similar to one from another species.
  • * The mutation compromised the energy transfer efficiency between PC and APC, increased susceptibility to light damage, and impaired binding with orange carotenoid protein (OCP), demonstrating the important role of the tricylindrical core in PBS
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Light harvesting proteins are optimized to efficiently collect and transfer light energy for photosynthesis. In eukaryotic dinoflagellates these complexes utilize chlorophylls and a special carotenoid, peridinin, and arrange them for efficient excitation energy transfer. At the same time, the carotenoids protect the system by quenching harmful chlorophyll triplet states.

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Article Synopsis
  • Surface sterilization and chemical degradation using solar energy can significantly improve public health by reducing disease and toxic chemical exposure.
  • A new photocatalyst made from lignin, a renewable polymer, demonstrates high efficiency in breaking down harmful organic compounds rapidly when exposed to sunlight.
  • The lignin-based photocatalyst maintains stability over multiple uses, effectively degrades substances like atenolol and PFOA, and can also kill bacteria, making it adaptable for various applications in environmental health.
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  • Phycobilisome (PBS) is a crucial pigment-protein complex in cyanobacteria and red algae that captures sunlight and transfers energy to photosystems (PS), with less research focused on the interactions between PBS and PS.
  • The study investigated the newly found PBS linker protein, ApcG, by creating a deletion mutant in Synechocystis sp. PCC 6803, revealing that removing ApcG affects the structure of the allophycocyanin (APC) core and leads to the formation of spectrally diverse APC subgroups.
  • Although ApcG deletion did not generally disrupt the state transition process, it resulted in increased PBS-related fluorescence in mutant cells, pointing to a previously
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Gallium nitride quantum dots (GaN QDs) are a promising material for optoelectronics, but the synthesis of freestanding GaN QDs remains a challenge. To date, the size-dependent photonic properties of freestanding GaN QDs have not been reported. Here, we examine the photonic properties exhibited by thin films composed of GaN QDs synthesized by nonequilibrium plasma aerotaxy.

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Article Synopsis
  • Light harvesting by antenna systems is vital for photosynthesis in organisms like cyanobacteria, which use a pigment-protein complex called phycobilisome to capture light energy.
  • Cyanobacteria also possess chlorophyll-binding proteins, such as CP43 and CP47, that help transfer energy to reaction centers and manage excess energy.
  • The study examines the evolution and relationships of these proteins, suggesting they share a common ancestor and highlighting the evolutionary closeness between CP47 and IsiA.
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Photosystem II in oxygenic organisms is a large membrane bound rapidly turning over pigment protein complex. During its biogenesis, multiple assembly intermediates are formed, including the CP43-preassembly complex (pCP43). To understand the energy transfer dynamics in pCP43, we first engineered a His-tagged version of the CP43 in a CP47-less strain of the cyanobacterium Synechocystis 6803.

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Application of femtosecond time-resolved transient absorption spectroscopy on all- and central- isomers of two exemplary carotenoids, lutein and spirilloxanthin, performed at room and cryogenic temperatures in the spectral range expanded toward UV revealed new spectroscopic transient features for the isomers. Notably, particularly for the central- spirilloxanthin, a very distinct additional transient absorption band is observed on the short wavelength side of the main excited-state absorption band of the S state, having the same temporal characteristics as the latter one. This band is absent in transient absorption spectra of all- isomers, suggesting it could be assigned to "transient -peak.

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Cyanobacteria inhabiting desert biological soil crusts face the harsh conditions of the desert. They evolved a suite of strategies toward desiccation-hydration cycles mixed with high light irradiations, etc. In this study we purified and characterized the structure and function of Photosystem I (PSI) from Leptolyngbya ohadii, a desiccation-tolerant desert cyanobacterium.

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A panchromatic triad and a charge-separation unit are joined in a crossbar architecture to capture solar energy. The panchromatic-absorber triad (T) is comprised of a central free-base porphyrin that is strongly coupled direct ethyne linkages to two perylene-monoimide (PMI) groups. The charge-separation unit incorporates a free-base or zinc chlorin (C or ZnC) as a hole acceptor (or electron donor) and a perylene-diimide (PDI) as an electron acceptor, both attached to the porphyrin diphenylethyne linkers.

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Light-harvesting antennas in photosynthesis capture light energy and transfer it to the reaction centers (RCs) where photochemistry takes place. The sustainable growth of the reef-building corals relies on a constant supply of the photosynthates produced by the endosymbiotic dinoflagellate, belonging to the family of Symbiodiniaceae. The antenna system in this group consists of the water-soluble peridinin-chlorophyll a-protein (PCP) and the intrinsic membrane chlorophyll a-chlorophyll c-peridinin protein complex (acpPC).

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The photophysical characterization of two dyes used as scintillators, crystalline -terphenyl and EJ-276, a plastic heavily doped with 2,5-diphenyloxazole (DPO), was investigated with steady-state absorption, time-resolved emission, and transient absorption at room and cryogenic temperatures. Application of time-gated emission spectroscopy allowed for the measurement of phosphorescence spectra and their temporal dynamics. The photophysical properties of plastic-embedded DPO are not substantially altered compared to those previously determined for this dye in solvents.

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Electronic interactions between tetrapyrroles are utilized in natural photosynthetic systems to tune the light-harvesting and energy-/charge-transfer processes in these assemblies. Such interactions also can be employed to tailor the electronic properties of tetrapyrrolic dyads and larger arrays for use in materials science and biomedical research. Here, we have utilized static and time-resolved optical spectroscopy to characterize the optical absorption and emission properties of a set of chlorin and bacteriochlorin dyads with varying degrees of through-bond (TB) and through-space (TS) interactions between the constituent macrocycles.

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Photosystem (PS) II is prone to photodamage both as a direct consequence of light, and indirectly by producing reactive oxygen species. Engineering high-light tolerance in cyanobacteria with minimal impact on PSII function is desirable in synthetic biology. IsiA, a CP43 homolog found exclusively in cyanobacteria, can dissipate excess light energy.

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The formation of cyclobutane pyrimidine dimers (CPDs) by a "dark" pathway in melanocytes has been attributed to chemisensitization by dioxetanes produced from peroxynitrite oxidation of melanin or melanin precursors. These dioxetanes are proposed to decompose to triplet state compounds which sensitize CPD formation by triplet-triplet energy transfer. To determine whether such compounds are capable of sensitizing CPD formation, the putative decomposition products of 2,3-dioxetanes of variously substituted indoles were synthesized and their triplet state energies determined at 77 K.

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Panchromatic absorbers have potential applications in molecular-based energy-conversion schemes. A prior porphyrin-perylene dyad (, where "MI" denotes monoimide) coupled via an ethyne linker exhibits panchromatic absorption (350-700 nm) and a tetrapyrrole-like lowest singlet excited state with a relatively long singlet excited-state lifetime (τ) and increased fluorescence quantum yield (Φ) versus the parent porphyrin. To explore the extension of panchromaticity to longer wavelengths, three arrays have been synthesized: a chlorin-terrylene dyad (), a bacteriochlorin-terrylene dyad (), and a perylene-porphyrin-terrylene triad (), where the terrylene, a π-extended homologue of perylene, is attached via an ethyne linker.

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Organometallic halide perovskite (MAPPbBr3), Rust-based Vapor Phase Polymerization (RVPP)-PEDOT hole transporting layers and (RVPP-PEDOT)/MAPPbBr3 dual-layer, deposited on fluorine doped tin oxide glass were studied at room temperature using steady-state absorption, time-resolved photoluminescence imaging and femtosecond time-resolved absorption spectroscopy. Application of these techniques in conjunction with diverse excitation intensities allowed determination of various optoelectronic properties of the perovskite film and the time constant of the hole extraction process. Spectral reconstruction of the bandedge absorption spectrum using Elliot's formula enabled separation of the exciton band.

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Two benchmark sensitizers used for dye-sensitized solar cells, ruthenium polypyridyl N719 and Z907 dyes were investigated with spectroscopic methods as steady-state absorption, time-gated phosphorescence and femto-/nanosecond time-resolved transient absorption at room temperature and at 160 K. Aim of this study was to perform comprehensive photophysical study of dye excited singlet and triplet metal-to-ligand charge transfer (MLCT) states including states lifetimes, dependency on temperature and dye concentration and obtain detailed information on the excitation decay pathway. Transient absorption and phosphorescence decay data provided a clearer picture of the dynamics of the excited MLCT states.

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Oxygenic photosynthetic organisms have evolved a multitude of mechanisms for protection against high-light stress. IsiA, a chlorophyll -binding cyanobacterial protein, serves as an accessory antenna complex for photosystem I. Intriguingly, IsiA can also function as an independent pigment protein complex in the thylakoid membrane and facilitate the dissipation of excess energy, providing photoprotection.

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Article Synopsis
  • * One structure shows a 14-subunit LH1 ring that is open due to the presence of protein-W, while the other features a closed 16-subunit LH1 ring without the protein.
  • * The findings reveal important details about how quinones interact with the RC-LH1 complex, including a new conformational change when quinones bind and the role of protein-W in facilitating faster quinone exchange by preventing the LH1 ring from closing.
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  • Six zinc(II) porphyrins with varying numbers of -phenyl substituents were analyzed to understand how these groups affect their electronic and photophysical properties.
  • Spectroscopic data and theoretical calculations indicate that adding phenyl groups raises the energy of the highest occupied molecular orbital, leading to changes in absorption wavelengths and intensities.
  • Findings show increased fluorescence yields, changes in intersystem crossing, and unique photophysical behaviors in zinc porphyrins compared to their free base counterparts, providing valuable insights for applications in solar energy and life sciences.
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Excited-state properties of two novel metal-free custom-made dyes [()-2-cyano-3-(4-(()-2-(6-(4-methoxyphenyl)-9-octyl-9-carbazol-3-yl)vinyl)phenyl)acrylic acid] and [()-2-cyano-3-(4-(()-4-(diphenylamino)styryl)phenyl)acrylic acid] and two commercially available Ruthenium-based and dyes were investigated with application of time-resolved absorption and emission. Singlet excited state lifetimes of and were determined in acetonitrile and are 1.4 and 2.

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Carotenoids play a number of important roles in photosynthesis, primarily providing light-harvesting and photoprotective energy dissipation functions within pigment-protein complexes. The carbon-carbon double bond (C=C) conjugation length of carotenoids (), generally between 9 and 15, determines the carotenoid-to-(bacterio)chlorophyll [(B)Chl] energy transfer efficiency. Here we purified and spectroscopically characterized light-harvesting complex 2 (LH2) from containing the = 7 carotenoid zeta (ζ)-carotene, not previously incorporated within a natural antenna complex.

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