Publications by authors named "Nie Q"

(1) Background: The exact etiology for gastroschisis, the most common abdominal defect, is yet to be known, despite the rising prevalence of this condition. The leading theory suggests an increased familial risk, indicating a possible genetic component possibly in the context of environmental risk factors. This systematic review aims to summarize the studies focused on the identification of a potential genetic etiology for gastroschisis to elucidate the status of the field.

View Article and Find Full Text PDF

The rapid development of modern industries is accompanied with the aggravating water heavy metal pollution, which poses a potential threat to the aquatic environment and the health of local populations. As an efficient and economical adsorbent, biochar demonstrates the adsorption capacity for heavy metal ions and its adsorption capacity is significantly enhanced after modification. Therefore, biochar can effectively mitigate environmental pollution.

View Article and Find Full Text PDF

We here report an efficient DNA-compatible furan-thiol-amine reaction for macrocyclization and late-stage amine transformation. This reaction, conducted under mild conditions, enables the facile cyclization of DNA-conjugated linear peptides into thiopyrrole-grafted macrocycles regardless of ring size or side-chain modification with good to excellent conversion yields. Additionally, this strategy was employed for the late-stage transformation of terminal amines, serving as critical intermediates in the construction of DNA-encoded peptide libraries.

View Article and Find Full Text PDF

Previously, animal breeding prioritized enhancing key economic traits to improve production efficiency, leading to a gradual difference in meat quality. However, the genetic factors influencing meat quality remain unclear. To identify key genetic pathways contributing to meat quality, native Chinese yellow-feathered chicken (Qingyuan Partridge Chicken, QPC; female, n=10), and commercial chicken broiler (Cobb broiler, CB; female, n=10) were used for meat quality assessment through metabolomics, proteomics, and phosphoproteomics sequencing.

View Article and Find Full Text PDF

A full-scale simultaneous partial nitrification, anaerobic ammonia oxidation (anammox), and denitrification (SNAD) reactor was initiated to address the problem of high energy consumption for the treatment of low C/N wastewater. The SNAD system achieved a nitrogen removal rate of 0.9 kg/(m·d) at an influent NH₄-N concentration of 500 mg/L after 450 days of stable operation.

View Article and Find Full Text PDF

Rationale: Idiopathic noncirrhotic portal hypertension (INCPH) is a rare liver disorder with elevated portal pressure without cirrhosis, making diagnosis challenging. This case report presents a 46-year-old Chinese male with INCPH, highlighting the crucial role of liver biopsy.

Patient Concerns: A 46-year-old male presented with persistent fatigue that lasted for 2 months and significantly worsened over the last 3 days.

View Article and Find Full Text PDF

Cyclopentachromone, distinguished by its 6/6/5 heterotricyclic ring structure, is a key building block in many bioactive natural products, yet its enzymatic origin remains unclear. We identified a new class of cyclopentachromone-containing compounds, termed isochromosulfines, characterized by unique C-S bonds. A distinct FAD-dependent monooxygenase, IscL, was identified to catalyze the formation of the 6/6/5 cyclopentadiene intermediate, 2-remisporine A, from a 6/6/6 xanthone precursor via benzene ring contraction.

View Article and Find Full Text PDF

Epithelial mesenchymal transition (EMT) of lens epithelial cells (LECs) is one of the most important pathogenic mechanisms in lens fibrotic disorders, and the regulatory mechanisms of EMT have not been fully understood. Here, we demonstrate that the cAMP-response element binding protein (CREB) can regulate lens EMT in a phosphorylation-dependent and -independent manners with dual mechanisms. First, CREB-S133 phosphorylation is implicated in TGFβ-induced EMT of mouse LECs and also in injury-induced mouse anterior subcapsular cataract (ASC) model.

View Article and Find Full Text PDF

Rationale: Lipoma arborescens (LA) is a rare, benign proliferative disorder of the synovial lining that typically affects middle-aged individuals, predominantly in the knee joint. However, its occurrence in younger patients is unusual and may pose unique diagnostic and therapeutic challenges. This case report aims to highlight the clinical, imaging, and therapeutic aspects of LA in a young adult, thereby expanding the understanding of its presentation in this age group.

View Article and Find Full Text PDF
Article Synopsis
  • This study focused on creating machine learning models to identify predictive features of dementia in older adults who initially showed normal cognition.
  • Four models were developed and tested, with the random forest model showing the highest accuracy (93%) using factors like memory test results, education, and follow-up time.
  • The findings suggest that this machine learning approach can effectively predict dementia in primary healthcare settings, helping to track cognitive changes and enable early intervention.
View Article and Find Full Text PDF
Article Synopsis
  • - Cell-cell communication (CCC) involves interactions across different scales, from large clusters of cells to individual cell pairs, making it a complex hierarchical structure influenced by signaling molecules like ligands and receptors.
  • - Current methods for studying CCC mainly focus on pre-defined groups and overlook the inherent hierarchical organization that affects how cells communicate.
  • - The newly developed computational framework, CrossChat, utilizes a multi-resolution clustering method and tree detection approach to analyze and understand these hierarchical structures in CCC, as demonstrated through various datasets related to COVID-19 and embryonic development.
View Article and Find Full Text PDF

Background: Single-cell transcriptome sequencing (scRNA-seq) has revolutionized the study of immune cells by overcoming the limitations of traditional antibody-based identification and isolation methods. This advancement allows us to obtain comprehensive gene expression profiles from a diverse array of vertebrate species, facilitating the identification of various cell types. Comparative immunology across vertebrates presents a promising approach to understanding the evolution of immune cell types.

View Article and Find Full Text PDF

Halogenases are spurring a growing interest in the fields of biosynthesis and biocatalysis. Although various halogenases have been identified in numerous natural product biosynthetic pathways, the mechanisms for multiple halogenations and site-selectivity remain largely unclear. In this study, we biochemically characterized FasV, a flavin-dependent halogenase (FDH) that catalyzes five successive chlorinations in the biosynthesis of the naphthacene-containing aromatic polyketide naphthacemycin.

View Article and Find Full Text PDF

The utilization of Pd(ii)-catalyzed oxidation for the transformation of terminal olefins into methyl ketones has emerged as a particularly intriguing and versatile strategy in organic synthesis. Herein we report a novel Pd(ii)-catalyzed Wacker-type oxidation with covalent bidentate ligands. The ligand, 1-(pyridin-2-yl)-1,2-dihydro-3-indazol-3-one, exhibits excellent performance in converting olefins to ketones.

View Article and Find Full Text PDF

While bullying has significant long-term impacts on mental health, the developmental relationship between empathy and bullying behaviors remains unclear. Specifically, it is uncertain whether bullying perpetration and victimization predict changes in empathy over time or if empathy influences these behaviors. This study addresses this gap by examining the longitudinal dynamic relationship between empathy, bullying perpetration, and victimization.

View Article and Find Full Text PDF

The development of photochromic dithienylethene (DTE) derivatives activated by visible light, particularly those exhibiting aggregation-induced emission (AIE) properties, is highly sought after for applications in photoelectric functional materials and biological systems. In this study, we rationally designed and successfully synthesized a novel cyanostilbene- and nitro-functionalized DTE derivative (6) featuring a reinforced acceptor (A)-DTE-acceptor (A) structural motif. Each of the two cyanostilbene fragments bearing nitrobenzene groups imparts both electron-withdrawing effects and AIE characteristics, thereby ensuring efficient visible light-driven photochromic performance.

View Article and Find Full Text PDF

Uric acid, urea, and other metabolites in urine after exercise often reflect chronic injury syndrome in athletes. However, traditional urine detection methods have issues such as high costs and low detection sensitivity. SERS can rapidly, continuously, and sensitively monitor metabolites in human urine.

View Article and Find Full Text PDF

Etomidate, an ultrashort-acting non-barbiturate sedative derived from imidazole, exerts potent inhibitory effects on the central nervous system. It is commonly employed for the induction of intravenous general anaesthesia or assisted anaesthesia. Recently, etomidate has emerged as an alternative to narcotics and novel psychoactive substances, leading to an increasing trend of abuse.

View Article and Find Full Text PDF
Article Synopsis
  • Fungal ribosomally synthesized and post-translationally modified peptides (RiPPs) are important natural products with various biological activities such as anticancer and immunosuppressive effects.
  • Despite their significance, discovering these compounds has been difficult, leading to only a few identified types that primarily include cycloamanides, borosins, and dikaritins.
  • Recent advancements in bioinformatics and genome-guided discovery methods promise to enhance the identification of novel bioactive fungal RiPPs by integrating knowledge of biosynthetic pathways with gene-editing technologies.
View Article and Find Full Text PDF

Propane dehydrogenation (PDH), an atom-economic reaction to produce high-value-added propylene and hydrogen with high efficiency, has recently attracted extensive attention. The severe deactivation of Pt-based catalysts through sintering and coking remains a major challenge in this high-temperature reaction. The introduction of Sn as a promoter has been widely applied to improve the stability and selectivity of the catalysts.

View Article and Find Full Text PDF

Objective: To compare the differences in risk factors and etiological classification between cerebral infarction in young patients and elderly patients, and explore the correlation between cerebral infarction in young patients and white matter lesions (WMLs).

Methods: Sixty young patients with cerebral infarction and 142 elderly patients with cerebral infarction were included. The distributions of risk factors such as hypertension, diabetes, heart disease, smoking status, alcohol consumption status, migraine status, and WMLs in the two groups were carefully investigated and statistically analyzed.

View Article and Find Full Text PDF
Article Synopsis
  • High dimensionality in single cell transcriptomics (scRNAseq) necessitates careful gene selection for effective analysis, particularly for tasks like cell clustering.
  • Different feature selection methods yield varying performances depending on the analysis goals, with random features being sufficient for basic cell type identification but not for detecting subtle differences.
  • The authors propose a new feature selection method that simplifies the process using an analytical model, enabling more accurate identification of rare cell types without relying on arbitrary parameters, and showing it outperforms standard methods like scanpy and Seurat.
View Article and Find Full Text PDF

Clarification is required when the term "carbohydrate" is used interchangeably with "saccharide" and "glycan." Carbohydrate classification based on human digestive enzyme activities brings clarity to the energy supply function of digestible sugars and starch. However, categorizing structurally diverse non-digestible carbohydrates (NDCs) to make dietary intake recommendations for health promotion remains elusive.

View Article and Find Full Text PDF
Article Synopsis
  • A new two-dimensional silver substrate with a high enhancement factor was created to improve the sensitivity and accuracy of detecting TNF-α in serum samples.
  • The detection method involved coupling DSP molecules with antibodies and using silver-coated gold nanospheres as SERS probes to form a sandwich structure for quantitative measurements.
  • The technique successfully differentiated between serum samples from healthy individuals and those with colon cancer, with significant statistical validation.
View Article and Find Full Text PDF