Publications by authors named "Nicola K Beck"

Article Synopsis
  • Salmonella enterica serovar Typhi (S. Typhi) causes Typhoid fever, and while blood cultures are the best way to diagnose it, they're hard to use in resource-limited areas.* -
  • Researchers developed a novel process control organism (PCO) as a biosafe surrogate to test various environmental surveillance methods for detecting S. Typhi in water.* -
  • The PCO successfully mimicked S. Typhi in lab tests and was consistently detected in wastewater samples from India and Malawi, making it a reliable tool for validating environmental detection methods for this pathogen.*
View Article and Find Full Text PDF

Objectives: Appropriate face covering use at public venues can help mitigate the transmission of SARS-CoV-2 in the absence of widespread vaccination and provide protection when viral variants become more infectious. The objective of this study was to evaluate compliance with a statewide face mask mandate by examining trends in face covering use in publicly accessible spaces in King County, Washington.

Methods: From November 27, 2020, through May 11, 2021, we conducted a repeated cross-sectional observational study of face covering use across publicly accessible venues (eg, grocery and convenience stores, airport, transit center, post office).

View Article and Find Full Text PDF

Wastewater surveillance for SARS-CoV-2 may serve as a useful source of data for public health departments as the virus is shed in the stool of infected individuals. However, for wastewater data to be actionable, wastewater must be collected, concentrated, and analyzed in a timely manner. This manuscript presents modifications on a skimmed milk concentration protocol to reduce processing time, increase the number of samples that can be processed at once, and enable use in resource-limited settings.

View Article and Find Full Text PDF
Article Synopsis
  • Eradicating poliovirus is crucial for global public health, and as cases drop, understanding its persistence in the environment becomes increasingly important.
  • This study focused on how poliovirus types 2 and 3 persist in wastewater and sediment under different temperatures, exploring factors that influence their decay over time.
  • Findings revealed that temperature and the presence of sediment significantly affect how long the viruses remain viable, highlighting the need for ongoing environmental surveillance as poliovirus eradication efforts continue.
View Article and Find Full Text PDF

Enteric viruses, such as poliovirus, are a leading cause of gastroenteritis, which causes 2-3 million deaths annually. Environmental surveillance of wastewater supplements clinical surveillance for monitoring enteric virus circulation. However, while many environmental surveillance methods require liquid samples, some at-risk locations utilize pit latrines with waste characterized by high solids content.

View Article and Find Full Text PDF
Article Synopsis
  • * This study tested various methods for extracting and analyzing SARS-CoV-2 from wastewater in the Greater Seattle Area, identifying that skimmed milk flocculation is the most reliable and feasible method for low-resource settings.
  • * While bag-mediated filtration had the highest volume tested, its low recovery rates indicate that choosing the right concentration method is critical for accurate detection of the virus.
View Article and Find Full Text PDF
Article Synopsis
  • - The bag-mediated filtration system (BMFS) was created to improve the environmental surveillance of poliovirus (PV) and complements traditional methods focused on acute flaccid paralysis to help with PV eradication efforts in Nairobi, Kenya, from April to September 2015.
  • - During the study, environmental samples were collected and processed using two methods: BMFS (which filtered over 3 liters) and a grab sample method (collecting 1 liter). The samples were then analyzed for poliovirus presence using various techniques, including rRT-PCR.
  • - Results showed that BMFS detected Sabin polioviruses more frequently than the other method, especially Sabin-like PV type 3, indicating its effectiveness for environmental monitoring, while no
View Article and Find Full Text PDF

Nontuberculous mycobacteria (NTM), including complex (MAC), are emerging pathogens that can opportunistically cause debilitating pulmonary disease in susceptible human hosts. Potential sources of exposure in homes include point-of-use water sources, such as taps and showerheads, as well as gardening soils. The relative human health impacts of NTM in these home environments remain poorly understood.

View Article and Find Full Text PDF
Article Synopsis
  • This study highlights the importance of enteric virus surveillance due to their low infectious doses and long environmental persistence, using a novel bag-mediated filtration system (BMFS).
  • The researchers found that enteroviruses and PMMoV were present in 100% of wastewater samples collected from various sites in Kenya, while other viruses like adenovirus and norovirus were detected in most samples.
  • The consistent presence of these viruses indicates their potential use as contamination indicators and emphasizes the need for effective monitoring of water sources worldwide.
View Article and Find Full Text PDF
Article Synopsis
  • Poliovirus environmental surveillance (ES) is essential for tracking silent circulation of the virus, especially as clinical cases decline, and this study compares the effectiveness of a new bag-mediated filtration system (BMFS) to the traditional two-phase separation method.
  • In a study conducted in Pakistan from February to November 2016 with 117 samples, BMFS showed significantly better detection rates for both vaccine-related and wild poliovirus types compared to the two-phase method.
  • The enhanced detection in BMFS is attributed to a larger volume of water being tested (1620 mL vs. 150 mL), establishing it as a more effective technique for monitoring poliovirus in endemic regions.
View Article and Find Full Text PDF

Bioaerosol sampling and identification are vital for the assessment and control of airborne pathogens, allergens, and toxins. In-situ analysis of chemical and biological particulate matter can significantly reduce the costs associated with sample preservation, transport, and analysis. The analysis of conventional filters is challenging, due to dilute samples in large collection regions.

View Article and Find Full Text PDF
Article Synopsis
  • - Environmental surveillance of poliovirus (PV) is crucial for global eradication efforts, with the bag-mediated filtration system (BMFS) enhancing effectiveness compared to the WHO's two-phase grab method.
  • - The study improved the BMFS for use in wastewater and surface waters in Nairobi by modifying aspects such as bag size and filter design to increase efficiency.
  • - The enhanced BMFS can concentrate larger volumes of water (3-10 L down to 10 mL), resulting in a 6-20 times greater effective volume assayed than the WHO method, potentially reducing false-negative results and simplifying logistics for virus detection.
View Article and Find Full Text PDF
Article Synopsis
  • Environmental surveillance of poliovirus and non-enveloped viruses is crucial for detecting silent outbreaks and ensuring successful eradication efforts.
  • The study tested a bag-mediated filtration system for filtering water samples, finding that preservatives (sodium benzoate and calcium propionate) and antibiotics improved the longevity and recovery of viruses like poliovirus type 1 during storage.
  • Using these additives can enhance virus detection in environmental samples, making it easier to monitor and respond to potential health threats caused by viral circulation.
View Article and Find Full Text PDF

Poliovirus (PV) is on the verge of global eradication. Due to asymptomatic shedding, eradication certification requires environmental and clinical surveillance. Current environmental surveillance methods involve collection and processing of 400-mL to 1-L grab samples by a two-phase separation method, where sample volume limits detection sensitivity.

View Article and Find Full Text PDF

Background: Farmers' markets have been growing in popularity in the United States, but the microbial quality and safety of the food sold at these markets is currently unknown. The purpose of this study was to assess the microbial safety and quality of fresh basil, parsley and cilantro sold at farmers' markets in the Los Angeles, Orange County and greater Seattle areas.

Results: A total of 133 samples (52 basil, 41 cilantro and 40 parsley) were collected from 13 different farmers' markets and tested for Salmonella and generic Escherichia coli.

View Article and Find Full Text PDF

Background: Methicillin-resistant Staphylococcus aureus (MRSA) strains were isolated and characterized from environmental surfaces of two fire stations from two independent districts in the northwestern United States. After the first sampling and before the second sampling, education was provided, additional signage was added, and changes in disinfection protocols were put in place. Nasal carriage of MRSA was determined at the second sampling.

View Article and Find Full Text PDF

Although the efficacy of chlorine disinfection under controlled laboratory conditions is well known, the effectiveness of chlorine under field point-of-use (POU) conditions is still not clearly understood and may be impacted by a variety of factors. This study evaluated the effectiveness of POU chlorine disinfection in rural Ecuador under typical use conditions and compared this effectiveness with the efficacy in controlled laboratory conditions. While reductions of indicator organisms were slightly higher in households that used chlorination, no significant differences were seen between households employing POU chlorination and the households with no chlorination (1-1.

View Article and Find Full Text PDF

Objectives: The aim of this study was to characterize a novel conjugative transposon Tn6009 composed of a Tn916 linked to a Staphylococcus aureus mer operon in representative Gram-positive and Gram-negative bacteria isolated in Nigeria and Portugal.

Methods: Eighty-three Gram-positive and 34 Gram-negative bacteria were screened for the presence of the Tn6009 using DNA-DNA hybridization, PCR, hybridization of PCR products, sequencing and mating experiments by established procedures.

Results: Forty-three oral and 23 urine Gram-negative and Gram-positive isolates carried the Tn6009.

View Article and Find Full Text PDF