Publications by authors named "Nicholas Jannetty"

Borrelia burgdorferi, the tick-transmitted spirochete agent of Lyme disease, has a highly segmented genome with a linear chromosome and various linear or circular plasmids. Here, by imaging several chromosomal loci and 16 distinct plasmids, we show that B. burgdorferi is polyploid during growth in culture and that the number of genome copies decreases during stationary phase.

View Article and Find Full Text PDF

We describe a general computational approach to designing self-assembling helical filaments from monomeric proteins and use this approach to design proteins that assemble into micrometer-scale filaments with a wide range of geometries in vivo and in vitro. Cryo-electron microscopy structures of six designs are close to the computational design models. The filament building blocks are idealized repeat proteins, and thus the diameter of the filaments can be systematically tuned by varying the number of repeat units.

View Article and Find Full Text PDF

To achieve robust replication, bacteria must integrate cellular metabolism and cell wall growth. While these two processes have been well characterized, the nature and extent of cross-regulation between them is not well understood. Here, using classical genetics, CRISPRi, metabolomics, transcriptomics and chemical complementation approaches, we show that a loss of the master regulator Hfq in Caulobacter crescentus alters central metabolism and results in cell shape defects in a nutrient-dependent manner.

View Article and Find Full Text PDF
Article Synopsis
  • Small RNAs are key regulatory molecules in eukaryotic genomes, influencing processes like gene regulation and genome defense; the study focuses on the tammar wallaby as a model for understanding these mechanisms in marsupials.
  • Utilizing next-generation sequencing, researchers characterized major classes of small RNAs in the tammar wallaby, specifically examining micro RNAs (miRNAs), piwi interacting RNAs (piRNAs), and a new class called crasiRNAs for their functions and genomic features.
  • The analysis revealed highly conserved miRNA genes, identified unique tammar miRNA targets without human counterparts, and provided the first comprehensive examination of crasiRNAs, enhancing knowledge of small RNA evolution in this marsupial species.
View Article and Find Full Text PDF