The conductor-like screening model (COSMO) was used to investigate the solvent influence on electronic g-values of organic radicals. The previously studied diphenyl nitric oxide and di-tert-butyl nitric oxide radicals were taken as test cases. The calculations employed spin-unrestricted density functional theory and the BP and B3LYP density functionals.
View Article and Find Full Text PDFBinuclear, mixed valence copper complexes with a [Cu(+1)(.5), Cu(+1)(.5)] redox state and S = (1)/(2) can be stabilized with rigid azacryptand ligands.
View Article and Find Full Text PDFReaction of the mononuclear Ni(II) thiolate complexes [Ni(L)] [L, L(1), H2L(1), bis(2-mercaptoethyl)-1,2-dimercaptoethane; L(2), H2L(2), N,N'-dimethyl-N,N'-bis(2-mercaptoethyl)-bis(aminoethyl)sulfide] with [FeCp(CO)2I] gives the dithiolate-bridged heterobimetallic species, [Ni(L(1))FeCp(CO)]PF6, 1, and [Ni(L(2))FeCp]I, 2, respectively. Binding of a Fe(CO)3 fragment via reaction of square-planar [Ni(pdt)(dppe)] (dppe, 1,2-diphenylphosphinoethane; pdt(2-), 1,3-propanedithiolate) with Fe3(CO)12 or [Fe(CO)3(BDA)] (BDA, benzylidene acetone) affords diamagnetic [(dppe)Ni(mu-pdt)Fe(CO)3], 3, in which the Ni(II) center is bound tetrahedrally to two thiolate S-donors and to two P-donors. The complex [(dppe)Ni(mu-pdt)Fe(CO)3], 3, reacts in solution via rearrangement to afford [(OC)Ni(mu-dppe)(mu-pdt)Fe(CO)2], 4, in which one P-donor of dppe is bound to Ni and the other to Fe, and a CO ligand has transferred from Fe to Ni.
View Article and Find Full Text PDFKa band ESEEM spectroscopy was used to determine the hyperfine (hfi) and nuclear quadrupole (nqi) interaction parameters for the oxo-17O ligand in [Mo 17O(SPh)4]-, a spectroscopic model of the oxo-Mo(V) centers of enzymes. The isotropic hfi constant of 6.5 MHz found for the oxo-17O is much smaller than the values of approximately 20-40 MHz typical for the 17O nucleus of an equatorial OH(2) ligand in molybdenum enzymes.
View Article and Find Full Text PDFThe effect of loss of the 34-kDa periplasmic NosX protein on the properties of N2O reductase was investigated with an N2O-respiration negative, double mutant of the paralogous genes nosX and nirX of Paracoccus denitrificans. In spite of absence of whole-cell N2O-reducing activity, the purified reductase was catalytically active, which attributes NosX a physiological role in sustaining the reaction cycle. N2O reductase exhibited the spectroscopic features of Cu(A) and the redox-inert, paramagnetic state, Cu(Z)*, of the catalytic center.
View Article and Find Full Text PDFThe three diamagnetic square planar complexes of nickel(II), palladium(II), and platinum(II) containing two S,S-coordinated 3,5-di-tert-butylbenzene-1,2-dithiolate ligands, (L(Bu))(2-), namely [M(II)(L(Bu))(2)](2-), have been synthesized. The corresponding paramagnetic monoanions [M(II)(L(Bu))(L(Bu)(*))](-) (S = (1)/(2)) and the neutral diamagnetic species [M(II)(L(Bu)(*))(2)] (M = Ni, Pd, Pt) have also been generated in solution or in the solid state as [N(n-Bu)(4)][M(II)(L(Bu))(L(Bu)(*))] salts. The corresponding complex [Cu(III)(L(Bu))(2)](-) has also been investigated.
View Article and Find Full Text PDFIn this paper, the calculation of electric-field-like properties based on higher-order Douglas-Kroll-Hess (DKH) transformations is discussed. The electric-field gradient calculated within the Hartree-Fock self-consistent field framework is used as a representative property. The properties are expressed as an analytic first derivative of the four-component Dirac energy and the nth-order DKH energy, respectively.
View Article and Find Full Text PDFThe reaction of three different 1-phenyl and 1,4-diphenyl substituted S-methylisothiosemicarbazides, H(2)[L(1-6)], with Ni(OAc)(2).4H(2)O in ethanol in the presence of air yields six four-coordinate species [Ni(L(1-6)(*))(2)] (1-6) where (L(1-6)(*))(1-) represent the monoanionic pi-radical forms. The crystal structures of the nickel complexes with 1-phenyl derivatives as in 1 reveal a square planar structure trans-[Ni(L(1)(-3)(*))(2)], whereas the corresponding 1,4-diphenyl derivatives are distorted tetrahedral as is demonstrated by X-ray crystallography of [Ni(L(5)(*))(2)] (5) and [Ni(L(6)(*))(2)] (6).
View Article and Find Full Text PDFThe Na(+)-translocating NADH:quinone oxidoreductase from Vibrio cholerae contains a single Fe-S cluster localized in subunit NqrF. Here we study the electronic properties of the Fe-S center in a truncated version of the NqrF subunit comprising only its ferredoxin-like Fe-S domain. Mössbauer spectroscopy of the Fe-S domain in the oxidized state is consistent with a binuclear Fe-S cluster with tetrahedral sulfur coordination by the cysteine residues Cys(70), Cys(76), Cys(79), and Cys(111).
View Article and Find Full Text PDFQuantum mechanical/molecular mechanical (QM/MM) methods have been used in conjunction with density functional theory (DFT) and correlated ab initio methods to predict the electron paramagnetic resonance (EPR) and Mossbauer (MB) properties of Compound I in P450(cam). For calibration purposes, a small Fe(IV)-oxo complex [Fe(O)(NH(3))(4)(H(2)O)](2+) was studied. The (3)A(2) and (5)A(1) states (in C(4)(v)() symmetry) are found to be within 0.
View Article and Find Full Text PDFBroken-symmetry density functional theory was used to study the catalytic center of manganese catalase in the superoxidized Mn(III)/Mn(IV) state. Heisenberg exchange coupling constants, 55Mn and 14N hyperfine coupling constants (hfcs) and nuclear quadrupole splittings, as well as the electronic g tensors were evaluated for different model systems of the active site after complete geometry optimizations in the high-spin and broken-symmetry states. A comparison of the experimental data with the spectroscopic parameters computed for the models with unprotonated and protonated mu-oxo bridges shows best agreement between theory and experiment for a Mn2(mu-O)2(mu-OAc) core.
View Article and Find Full Text PDFUsing magnetic circular dichroism (MCD) spectroscopy together with DFT calculations, the spin density distributions in five-coordinate [Fe(TPP)(NO)] (I) and six-coordinate [Fe(TPP)(MI)(NO)] (II, MI = 1-methylimidazole) are defined. In the five-coordinate complex, a strong Fe-NO sigma bond between pi(*)(h) and d(z)(2) is present that leads to a large transfer of spin density from the NO ligand to Fe(II) corresponding to an electronic structure with noticeable Fe(I)-NO(+) character. Consequently, the MCD spectrum is dominated by paramagnetic C-term contributions.
View Article and Find Full Text PDF57Fe electric and magnetic hyperfine parameters were calculated for a series of 10 iron model complexes, covering a wide range of oxidation and spin states. Employing the B3LYP hybrid method, results from nonrelativistic density functional theory (DFT) and quasi-relativistic DFT within the zero-order regular approximation (ZORA) were compared. Electron densities at the iron nuclei were calculated and correlated with experimental isomer shifts.
View Article and Find Full Text PDFThe electronic structures of two formally isoelectronic transition-metal dithiolato complexes [Fe(L)2]2- (1) and [Co(L Bu)2]1- (2) both possessing a spin triplet ground state (St=1) have been investigated by various spectroscopic and density functional methods; H2L Bu represents the pro-ligand 3,5-di-tert-butylbenzene-1,2-dithiol and H2L is the corresponding unsubstituted benzene-1,2-dithiol. An axial zero-field splitting (D) of +32 cm(-1) for 2 has been measured independently by SQUID magnetometry, far-infrared absorption, and variable-temperature and variable-field (VTVH) magnetic circular dichroism spectroscopies. A similar D value of +28 cm(-1) is obtained for 1 on the basis of VTVH SQUID measurements.
View Article and Find Full Text PDFDetailed spectroscopic and computational studies of the low-spin iron complexes [Fe(III)(S2(Me2)N3 (Pr,Pr))(N3)] (1) and [Fe(III)(S2(Me2)N3 (Pr,Pr))]1+ (2) were performed to investigate the unique electronic features of these species and their relation to the low-spin ferric active sites of nitrile hydratases. Low-temperature UV/vis/NIR and MCD spectra of 1 and 2 reflect electronic structures that are dominated by antibonding interactions of the Fe 3d manifold and the equatorial thiolate S 3p orbitals. The six-coordinate complex 1 exhibits a low-energy S(pi) --> Fe 3d(xy) (approximately 13,000 cm(-1)) charge-transfer transition that results predominantly from the low energy of the singly occupied Fe 3d(xy) orbital, due to pure pi interactions between this acceptor orbital and both thiolate donor ligands in the equatorial plane.
View Article and Find Full Text PDFApproximations to the Breit-Pauli form of the spin-orbit coupling (SOC) operator are examined. The focus is on approximations that lead to an effective quasi-one-electron operator which leads to efficient property evaluations. In particular, the accurate spin-orbit mean-field (SOMF) method developed by Hess, Marian, Wahlgren, and Gropen is examined in detail.
View Article and Find Full Text PDFA single-crystal study of cis,trans-(L-N2S2)MoVOCl (1) doped into cis,trans-(N2S2)MoVIO2 (3) has enabled the g-tensor of 1 and its orientation with respect to the molecular structure to be determined. The EPR parameters (g1, 2.004; g2, 1.
View Article and Find Full Text PDFIsolation and purification of the [NiFe] hydrogenase of Desulfovibrio vulgaris Miyazaki F under aerobic conditions leads to a mixture of two states, Ni-A (unready) and Ni-B (ready). The two states are distinguished by different activation times and different EPR spectra. HYSCORE and ENDOR data and DFT calculations show that both states have an exchangeable proton, albeit with a different (1)H hyperfine coupling.
View Article and Find Full Text PDFThe bidentate ligands N-phenyl-o-phenylenediamine, H(2)((2)L(N)IP), or its analogue 2-(2-trifluoromethyl)anilino-4,6-di-tert-butylphenol, ((4)L(N)IP), react with [Co(II)(CH(3)CO(2))(2)]4H(2)O and triethylamine in acetonitrile in the presence of air yielding the square-planar, four-coordinate species [Co((2)L(N))(2)] (1) and [Co((4)L(O))(2)] (4) with an S=1/2 ground state. The corresponding nickel complexes [Ni((4)L(O))(2)] (8) and its cobaltocene reduced form [Co(III)(Cp)(2)][Ni((4)L(O))(2)] (9) have also been synthesized. The five-coordinate species [Co((2)L(N))(2)(tBu-py)] (2) (S=1/2) and its one-electron oxidized forms [Co((2)L(N))(2)(tBu-py)](O(2)CCH(3)) (2 a) or [Co((2)L(N))(2)I] (3) with diamagnetic ground states (S=0) have been prepared, as has the species [Co((4)L(O))(2)(CH(2)CN)] (7).
View Article and Find Full Text PDFLigating properties of four potentially tridentate bisphenol ligands containing [O, X, O] donor atoms (X = S 1, Se 2, P 3, or P=O 4) toward the vanadium ions in +IV or +V oxidation states have been studied. Each ligand with different heterodonor atoms yields as expected nonoxovanadium(IV) complexes, V(IV)L(2), whose structures have been determined by X-ray diffraction methods as having six-coordinate V(IV), VO(4)X(2), core. Compounds 1-4 have also been studied with electrochemical methods, variable-temperature (2-295 K) magnetic susceptibility measurements, X-band electron paramagnetic resonance (EPR) (2-60 K) spectroscopy, and magnetic circular dichroism (MCD) (5 K) measurements.
View Article and Find Full Text PDFTwo series of square planar, diamagnetic, neutral complexes of nickel(II), palladium(II), and platinum(II) containing two N,N-coordinated o-diiminobenzosemiquinonate(1-) pi radical ligands have been synthesized and characterized by UV-vis and (1)H NMR spectroscopy: [M(II)((2)L(ISQ))(2)], M = Ni (1), Pd (2), Pt (3), and [M(II)((3)L(ISQ))(2)] M = Ni (4), Pd (5), Pt (6). H(2)[(2)L(PDI)] represents 3,5-di-tert-butyl-o-phenylenediamine and H(2)[(3)L(PDI)] is N-phenyl-o-phenylenediamine; (L(ISQ))(1-) is the o-diiminobenzosemiquinonate pi radical anion, and (L(IBQ))(0) is the o-diiminobenzoquinone form of these ligands. The structures of complexes 1, 4, 5, and 6 have been (re)determined by X-ray crystallography at 100 K.
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