Publications by authors named "Naoto F Ishikawa"

We developed a new method for stable carbon and nitrogen isotopic (δC and δN) analysis of underivatized amino acid (AA) enantiomers simultaneously, based on high-performance liquid chromatography (HPLC) separation and off-line isotopic measurement. l- and d-Enantiomers of each AA were isolated using a ReproSil Chiral-AA column, purified by wet chemical procedure, and analyzed for δC and δN values with a nanomol-scale elemental analyzer/isotope-ratio mass spectrometry (nano-EA/IRMS) system. We successfully achieved the separation of l- and d-enantiomers of 15 proteinogenous AAs, with all l-enantiomers eluting before respective d-enantiomers.

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Differential migration strategies favour different sets of characteristics, including sexually selected ornamentation. Such phenotypic variation is particularly evident in a population with partial migration, where migrants and nonmigrants co-exist. Partial migration provides insights into the link among migration, local environment, and ornamentation, although empirical studies remain scarce.

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Rationale: Isolation of underivatized amino acids (AAs) using high-performance liquid chromatography (HPLC) is becoming a popular method for carbon (δ C) and nitrogen isotope (δ N) analyses of AAs because of the high analytical precision and for performing dual-isotope analysis. However, some AAs in natural samples, especially small, hydrophilic AAs, are not suitably separated using reversed-phase columns (e.g.

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Rationale: To achieve better precision and accuracy for δ C analysis of individual amino acids (AAs), we have developed a new analytical method based on multi-dimensional high-performance liquid chromatography (HPLC) and elemental analyzer/isotope ratio mass spectrometry (EA/IRMS). Unlike conventional methods using gas chromatography, this approach omits pre-column chemical derivatization, thus reducing systematic errors associated with the isotopic measurement.

Methods: The separation and isolation of individual AAs in a standard mixture containing 15 AAs and a biological sample, spear squid (Heterololigo bleekeri) were performed.

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The long-distance migrations by marine fishes are difficult to track by field observation. Here, we propose a new method to track such migrations using stable nitrogen isotopic composition at the base of the food web (δ N ), which can be estimated by using compound-specific isotope analysis. δ N exclusively reflects the δ N of nitrate in the ocean at a regional scale and is not affected by the trophic position of sampled organisms.

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We have improved a method for isolation and purification of individual amino acids for compound-specific radiocarbon analysis (CSRA). To remove high-performance liquid chromatography (HPLC) eluent blanks from isolated amino acid fractions prior to the radiocarbon (ΔC) measurement, each fraction was filtered through a membrane filter and then washed with diethyl ether twice. Radiocarbon measurements on standard amino acids processed and purified with the above method using elemental analyzer-accelerator mass spectrometry resulted in ΔC values that were in strong agreement ( R = 0.

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Article Synopsis
  • Food-web complexity makes it difficult to understand how food-web structure affects biodiversity, prompting the need for a new theoretical framework.
  • This framework introduces a method called food network unfolding, which simplifies complex food webs into linear food chains and defines three biodiversity indices: horizontal diversity (D₁), vertical diversity (D₂), and range diversity (D₃).
  • Testing this framework on riverine macroinvertebrate communities showed that the D indices, derived from biomass and stable isotope data, effectively captured changes in food-web structure better than Shannon's diversity index (H').
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The relationship between biodiversity and ecosystem functioning is an important theme in environmental sciences. We propose a new index for configuration of the biomass pyramid in an ecosystem, named integrated trophic position (iTP). The iTP is defined as a sum of trophic positions (i.

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The trophic discrimination factor (TDF) of nitrogen isotopes (N/N) within amino acids, between a stream-dwelling dobsonfly larva (: Megaloptera; Corydalidae) and its diet (chironomid larvae), was determined in controlled feeding experiments. Last-instar larvae of were collected from the Yozawa-gawa River, central Japan, and reared in the laboratory. After fed to satiation for 1 month, one group of larvae was each fed one living chironomid larva per day for 4 weeks, while a second group was starved for 8 weeks.

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Long-term monitoring of ecosystem succession provides baseline data for conservation and management, as well as for understanding the dynamics of underlying biogeochemical processes. We examined the effects of deforestation and subsequent afforestation of a riparian forest of Japanese cedar (Cryptomeria japonica) on stable isotope ratios of carbon (δ¹³C) and nitrogen (δ¹⁵N) and natural abundances of radiocarbon (Δ¹⁴C) in stream biota in the Mt. Gomadan Experimental Forest and the Wakayama Forest Research Station, Kyoto University, central Japan.

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Article Synopsis
  • Food webs consist of complex links between resource and consumer species, with herbivores being easier to classify trophically than higher-order consumers.
  • The study introduces stable nitrogen isotopic analysis of amino acids to better estimate the trophic positions of 200 free-roaming organisms from diverse environments, specifically coastal marine and terrestrial settings.
  • Results indicate a significant level of trophic omnivory among carnivorous species, revealing intricate food web structures and suggesting that this omnivorous behavior may be widespread in different ecosystems.
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We measured the natural abundances of radiocarbon (delta14C) in macroinvertebrates, fishes, and their potential food sources, collected from the upper and lower reaches of six temperate streams in Lake Biwa basin (central Japan), three of which flow on limestone bedrock. Several carbon storage reservoirs in the watersheds show distinctive delta14C signatures (e.g.

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The stable N isotopic composition of individual amino acids (SIAA) has recently been used to estimate trophic positions (TPs) of animals in several simple food chain systems. However, it is unknown whether the SIAA is applicable to more complex food web analysis. In this study we measured the SIAA of stream macroinvertebrates, fishes, and their potential food sources (periphyton and leaf litter of terrestrial C3 plants) collected from upper and lower sites in two streams having contrasting riparian landscapes.

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Carbon stable isotope ratios (δ(13)C) are widely used to trace resource transfer pathways, yet δ(13)C variation in freshwater autotrophs is not yet fully understood. We have analyzed data from 42 published studies, supplemented with some unpublished data, to show the determinants of lotic periphyton δ(13)C. At large spatial scales, we observed broad differences in periphyton δ(13)C among biomes and consistent longitudinal variation related to watershed area.

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