Biochim Biophys Acta Mol Cell Res
December 2024
Hepatocellular carcinoma (HCC) is one of the most prevalent cancers worldwide with a poor clinical prognosis. Protein phosphatase 1 regulatory subunit 14B (PPP1R14B) is an unidentified protein phosphatase 1 regulatory subunit that is associated with the occurrence and development of various cancers. Recently, PPP1R14B was found to contribute to paclitaxel resistance and cell progression in triple-negative breast cancer; however, the role of PPP1R14B in HCC is unknown.
View Article and Find Full Text PDFUbiquitin-specific peptidase 24 (USP24), a member of the deubiquitinase family, plays an important role in tumor regulation. However, the role of USP24 in Hepatocellular carcinoma(HCC)is unknown. The aim of our study was to explore the role of USP24 in HCC to seek new therapeutic targets for HCC.
View Article and Find Full Text PDFThe identification of arsenic (As)-contaminated areas is an important prerequisite for soil management and reclamation. Although previous studies have attempted to identify soil As contamination via machine learning (ML) methods combined with soil spectroscopy, they have ignored the rarity of As-contaminated soil samples, leading to an imbalanced learning problem. A novel ML framework was thus designed herein to solve the imbalance issue in identifying soil As contamination from soil visible and near-infrared spectra.
View Article and Find Full Text PDFOnco Targets Ther
March 2024
With the advent of the second industrial revolution, mining and metallurgical processes generate large volumes of tailings and mine wastes (TMW), which worsens global environmental pollution. Studying the occurrence of metal and metalloid elements in TMW is an effective approach to evaluating pollution linked to TMW. However, traditional laboratory-based measurements are complicated and time-consuming; thus, an empirical method is urgently needed that can rapidly and accurately determine elemental occurrence forms.
View Article and Find Full Text PDFWarm ambient conditions induce thermomorphogenesis and affect plant growth and development. However, the chromatin regulatory mechanisms involved in thermomorphogenesis remain largely obscure. In this study, we show that the histone methylation readers MORF-related gene 1 and 2 (MRG1/2) are required to promote hypocotyl elongation in response to warm ambient conditions.
View Article and Find Full Text PDFBackground: Antimicrobial peptides (AMPs) are promising alternative agents for antibiotics to overcome antibiotic resistance problems. But, it is difficult to produce large-scale antimicrobial research due to the toxicity towards expression hosts or degradation by peptidases in the host. Therefore, heterologous recombinant expression of antimicrobial peptides has always been a challenging issue.
View Article and Find Full Text PDFImmune-checkpoint blockade (ICB) therapies have been widely used in clinical treatment of cancer patients, but only 20-30% of patients benefit from immunotherapy. Therefore, it is important to decipher the molecular mechanism of resistance to ICB and develop new combined treatment strategies. PD-L1 up-regulation in tumor cells contributes to the occurrence of immune escape.
View Article and Find Full Text PDFTrichothecenes are highly toxic mycotoxins produced by fungi, while TRI101/201 family enzymes play a crucial role in detoxification through acetylation. Studies on the substrate specificity and catalytic kinetics of TRI101/201 have revealed distinct kinetic characteristics, with significant differences observed in catalytic efficiency toward deoxynivalenol, while the catalytic efficiency for T-2 toxin remains relatively consistent. In this study, we used structural bioinformatics analysis and a molecular dynamics simulation workflow to investigate the mechanism underlying the differential catalytic activity of TRI101/201.
View Article and Find Full Text PDFEnviron Sci Process Impacts
September 2023
Cosmetic additives (ADDs) and packaging plasticizers (PLAs) probably present potential risks and dangers to the environment and human body as emerging pollutants. To investigate their potential risks and dangers, five ADDs including methyl paraben (MET), ethyl paraben (ETH), propyl paraben (PRO), butyl-hydroxy anisole (BHA), and salicylic acid (SAL), as well as three PLAs including bisphenol A (BPA), bisphenol S (BPS) and tris(2-butoxyethyl) phosphate (TBEP) were selected as research objects, and ten mixture rays (R1-R10) composed of the eight components were designed by the uniform design ray (UD-Ray) method. The toxicities of the eight cosmetic pollutants and their eight-component mixture system towards sp.
View Article and Find Full Text PDFFor shade-intolerant plants, changes in light quality through competition from neighbors trigger shade avoidance syndrome (SAS): a series of morphological and physiological adaptations that are ultimately detrimental to plant health and crop yield. Phytochrome-interacting factor 7 (PIF7) is a major transcriptional regulator of SAS in Arabidopsis; however, how it regulates gene expression is not fully understood. Here, we show that PIF7 directly interacts with the histone chaperone anti-silencing factor 1 (ASF1).
View Article and Find Full Text PDFHeart disease is a very common high-incidence disease. Due to the wide variety of pathology of heart disease, how to improve the medical diagnosis of heart disease and carry out earlier intervention and treatment is a problem that needs to be solved urgently. The paper adds the decision tree algorithm and its comparison and proposes an optimized classification algorithm Co-SVM.
View Article and Find Full Text PDFPlant Physiol Biochem
December 2021
Rhododendron delavayi is a popular ornamental plant with globular flowers noted for their bright red color, but very limited studies have been reported on its flower color formation. In this study, we successfully isolated a novel DFR gene (RdDFR1) from red flowers of Rhododendron delavayi. Multiple sequence alignments revealed that RdDFR1 had the conserved NADP and substrate binding domain, and was classified into Asn-type DFR.
View Article and Find Full Text PDFDihydroflavonol 4-reductase (DFR), a key regulatory enzyme, participated in the biosynthesis of anthocyanins, proanthocyanidins and other flavonoids that essential for plant survival and human health. However, the role of this enzyme in is still unknown. Here, three putative genes were firstly isolated from .
View Article and Find Full Text PDFThe coexistence of various typical disinfectant pollutants has the potential to produce toxicity interaction towards organisms in the environment. A suitable model is necessary to evaluate the interaction quantitatively. Hence, the area-concentration ratio (ACR) method was modified (MACR) by combing confidence intervals to dynamically and quantitatively evaluate the toxicity interactions within disinfectant mixture pollutants.
View Article and Find Full Text PDFComput Intell Neurosci
July 2021
With a focus on fatigue driving detection research, a fully automated driver fatigue status detection algorithm using driving images is proposed. In the proposed algorithm, the multitask cascaded convolutional network (MTCNN) architecture is employed in face detection and feature point location, and the region of interest (ROI) is extracted using feature points. A convolutional neural network, named EM-CNN, is proposed to detect the states of the eyes and mouth from the ROI images.
View Article and Find Full Text PDFProc Natl Acad Sci U S A
December 2020
Nucleosome Assembly Protein 1 (NAP1) family proteins are evolutionarily conserved histone chaperones that play important roles in diverse biological processes. In this study, we determined the crystal structure of NAP1-Related Protein 1 (NRP1) complexed with H2A-H2B and uncovered a previously unknown interaction mechanism in histone chaperoning. Both in vitro binding and in vivo plant rescue assays proved that interaction mediated by the N-terminal α-helix (αN) domain is essential for NRP1 function.
View Article and Find Full Text PDFThe rice black-streaked dwarf virus (RBSDV) disease causes severe rice yield losses in Asia. RNA interference (RNAi) has been widely applied to develop antiviral varieties in plants. So far, only a few studies reported the application of RNAi in rice against RBSDV and most of them are lack of enough data to support its breeding potential, which limited the progress on developing RBSDV-resistant variety.
View Article and Find Full Text PDFCognitive impairment (CI) refers to dysfunctional cognition, which encompasses a spectrum of disorders, ranging from mild cognitive impairment to dementia. Any factor that results in cortical damage may cause CI. Total flavonoids of (TFSP), have shown promising antioxidant and protective effects in animal models.
View Article and Find Full Text PDFNucleic Acids Res
January 2020
As the largest group of MYB family transcription factors, R2R3-MYB proteins play essential roles during plant growth and development. However, the structural basis underlying how R2R3-MYBs recognize the target DNA remains elusive. Here, we report the crystal structure of Arabidopsis WEREWOLF (WER), an R2R3-MYB protein, in complex with its target DNA.
View Article and Find Full Text PDFBackground: The rice black-streaked dwarf virus (RBSDV) disease causes severe rice yield losses in Eastern China and other East Asian countries. Breeding resistant cultivars is the most economical and effective strategy to control the disease. However, few varieties and QTLs for RBSDV resistance have been identified to date.
View Article and Find Full Text PDFShade avoidance syndrome (SAS) allows a plant grown in a densely populated environment to maximize opportunities to access to sunlight. Although it is well established that SAS is accompanied by gene expression changes, the underlying molecular mechanism needs to be elucidated. Here, we identify the H3K4me3/H3K36me3-binding proteins, Morf Related Gene (MRG) group proteins MRG1 and MRG2, as positive regulators of shade-induced hypocotyl elongation in Arabidopsis ().
View Article and Find Full Text PDFNUCLEOSOME ASSEMBLY PROTEIN1 (NAP1) defines an evolutionarily conserved family of histone chaperones and loss of function of the NAP1 family genes () and causes abnormal root hair formation. Yet, the underlying molecular mechanisms remain unclear. Here, we show that NRP1 interacts with the transcription factor WEREWOLF (WER) in vitro and in vivo and enriches at the () promoter in a WER-dependent manner.
View Article and Find Full Text PDFInt J Environ Res Public Health
September 2015
Ammonia nitrogen wastewater (about 100 mg/L) was treated by two-stage ozone oxidation method. The effects of ozone flow rate and initial pH on ammonia removal were studied, and the mechanism of ammonia nitrogen removal by ozone oxidation was discussed. After the primary stage of ozone oxidation, the ammonia removal efficiency reached 59.
View Article and Find Full Text PDFJ Fuel Cell Sci Technol
February 2015
Thermal management in the fuel cell component of a direct fired solid oxide fuel cell gas turbine (SOFC/GT) hybrid power system can be improved by effective management and control of the cathode airflow. The disturbances of the cathode airflow were accomplished by diverting air around the fuel cell system through the manipulation of a hot-air bypass valve in open loop experiments, using a hardware-based simulation facility designed and built by the U.S.
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