Publications by authors named "Nam S Sim"

Objective: Transoral robotic surgery (TORS) has shown promising results in treating human papillomavirus (HPV)-positive oropharyngeal squamous cell carcinoma (OPSCC), and there has been increasing interest in incorporating neoadjuvant chemotherapy (NCT) prior to TORS. This study aimed to assess the feasibility and safety of sparing adjuvant RT following NCT and TORS.

Methods: A retrospective cohort study included consecutive patients with HPV-positive OPSCC who underwent NCT followed by TORS without adjuvant RT.

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Background: Sinonasal squamous cell carcinoma (SCC) is a rare disease entity, comprising less than 5% of malignancies of the head and neck. While surgery is the primary treatment approach, neoadjuvant and adjuvant therapies play crucial roles in enhancing the prognosis of patients undergoing treatment with the goal of cure. In this study, we aimed to explore the treatment outcomes of neoadjuvant chemotherapy (NAC) in patients with locally advanced sinonasal SCC.

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  • * A pathogenic variant was found in 31% of the total cases analyzed, with higher rates in specific conditions like focal cortical dysplasia type II (33%) and hemimegalencephaly (62%), particularly involving the mTOR signaling pathway.
  • * The identification of germline and somatic variants, especially in focal epilepsy genes, provides insights for future analyses on genetic factors related to surgical outcomes, which could enhance patient counseling and treatment plans.
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  • HPV-positive oropharyngeal squamous cell carcinoma (OPSCC) is linked to better clinical outcomes compared to HPV-negative OPSCC, but the effectiveness of immunotherapy in these patients is still uncertain.
  • Researchers conducted detailed analyses of tumor biopsies from patients to discover why some HPV-positive individuals did not respond well to immunotherapy.
  • They found that high levels of CD161 in resident memory T cells were associated with poor antitumor activity, suggesting that targeting CD161 may improve immunotherapy outcomes for HPV-positive OPSCC patients.
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Purpose: Clinical implications of neoadjuvant immunotherapy in patients with locally advanced but resectable head and neck squamous cell carcinoma (HNSCC) remain largely unexplored.

Patients And Methods: Patients with resectable HNSCC were randomized to receive a single dose of preoperative durvalumab (D) with or without tremelimumab (T) before resection, followed by postoperative (chemo)radiotherapy based on multidisciplinary discretion and 1-year D treatment. Artificial intelligence (AI)-powered spatial distribution analysis of tumor-infiltrating lymphocytes and high-dimensional profiling of circulating immune cells tracked dynamic intratumoral and systemic immune responses.

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Lymph node (LN) metastasis is an important factor in determining the treatment and prognosis of oropharyngeal squamous cell carcinoma (OPSCC). Here, we compared the somatic mutational profiles and clonal evolution of primary and metastatic LNs using multiregion sequencing of human papilloma virus (HPV)-positive OPSCC and HPV-negative OPSCC. We performed high-depth whole-exome sequencing (200×) of 76 samples from 18 patients with OPSCC (10 HPV-positive and 8 HPV-negative), including 18 primary tumor samples, 40 metastatic LN samples, and 18 normal tissue samples.

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  • Scientists studied tiny changes in our DNA that happen naturally as we grow, looking at samples from 190 people and 498 different organs.
  • * They found that early DNA changes were less common but had a bigger impact compared to later changes, which were more specific to certain organs and tissues.
  • * The research also showed that brain changes had a special pattern, giving us new ideas about how these DNA changes work depending on when and where they happen in our bodies.
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Pediatric thyroid cancer more frequently develops cervical node metastasis than adult thyroid cancer, even in differentiated thyroid carcinoma (DTC). Thus, cervical neck dissection often needs to be performed simultaneously with thyroidectomy in pediatric patients. Herein, we describe our experience with robot-assisted total thyroidectomy with/without robot-assisted neck dissection in pediatric patients compared with the conventional operated group.

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  • The study establishes long-term cultures of both murine and human salivary gland organoids that retain gland-specific genes and functions, helping to better understand salivary gland biology.
  • Human organoids can be derived from different cell types while maintaining their characteristics, indicating the ability to replicate the diversity of human salivary glands.
  • The research also enables the creation of tumoroid cultures for various types of salivary gland tumors, providing a platform for advancements in precision medicine and cancer treatment.
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Purpose: Monotherapy with eribulin or gemcitabine has been found to be moderately effective in treating soft-tissue sarcomas (STS). In this study, we evaluated the efficacy and safety of eribulin-gemcitabine combination therapy for the two most common histologic types of STS, liposarcoma and leiomyosarcoma.

Patients And Methods: In this nonrandomized, multicenter, phase II study, we included patients with progressive disease who had received one or two courses of chemotherapy that included doxorubicin.

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  • Cochlea macrophages play a crucial role in managing inflammation in the cochlea and may help protect against hearing damage due to sound exposure.
  • The study found that inflammatory monocytes begin to infiltrate the cochlea within 2 days after acoustic overstimulation, transforming into macrophages by days 3-5, while neutrophils are not significantly involved.
  • Early intervention targeting the immune response may be essential for preventing noise-induced hearing loss, as key inflammatory processes are activated soon after exposure to loud sounds.
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  • The study investigates the effectiveness of the ketogenic diet (KD) in patients with focal cortical dysplasia (FCD) linked to mTOR pathway dysregulation.
  • It included 25 patients who underwent a retrospective review, finding that nearly half had detectable mutations related to the mTOR pathway.
  • While patients with mTOR mutations showed a higher response to the KD (58.3% vs. 38.5%), the difference was not statistically significant, indicating that more research is needed due to the small sample size.
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  • Mitochondrial targeted therapy is an innovative cancer treatment approach aimed at tumors that resist standard methods, focusing on the damage caused by reactive oxygen species (ROS) in mitochondria.
  • The study explored the anticancer effects of nonthermal plasma-activated media (NTPAM) in head and neck cancer (HNC), revealing that NTPAM treatment significantly reduced HNC cell viability by enhancing apoptosis.
  • Transcriptomic analysis identified 1,610 differentially expressed genes, showing that NTPAM-induced mitochondrial damage increased mitochondrial ROS levels and activated key regulators ATF4 and CHOP, leading to cancer cell death.
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Aims: Focal cortical dysplasia (FCD) type 2 is an epileptogenic malformation of the neocortex associated with somatic mutations in the mammalian target of rapamycin (mTOR) pathway. Histopathologically, FCD 2 is subdivided into FCD 2a and FCD 2b, the only discriminator being the presence of balloon cells (BCs) in FCD 2b. While pro-epileptogenic immune system activation and inflammatory responses are commonly detected in both subtypes, it is unknown what contextual role BCs play.

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Objective: Focal cortical dysplasia (FCD) is a major cause of difficult-to-treat epilepsy in children and young adults, and the diagnosis is currently based on microscopic review of surgical brain tissue using the International League Against Epilepsy classification scheme of 2011. We developed an iterative histopathological agreement trial with genetic testing to identify areas of diagnostic challenges in this widely used classification scheme.

Methods: Four web-based digital pathology trials were completed by 20 neuropathologists from 15 countries using a consecutive series of 196 surgical tissue blocks obtained from 22 epilepsy patients at a single center.

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Aims: Tuberous sclerosis complex (TSC) is a genetic disorder associated with dysregulation of the mechanistic target of rapamycin complex 1 (mTORC1) signalling pathway. Neurodevelopmental disorders, frequently present in TSC, are linked to cortical tubers in the brain. We previously reported microRNA-34a (miR-34a) among the most upregulated miRs in tubers.

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  • Brain mosaic mutations contribute significantly to severe focal epilepsies linked to various cortical malformations.
  • Researchers collected cerebrospinal fluid (CSF) during surgery to identify somatic variants in cell-free DNA (cfDNA) using a specialized testing method.
  • Evidence showed that in 3 out of 12 patients with known brain mutations, these mutations could also be detected in cfDNA from CSF, indicating a new potential way to diagnose the causes of epilepsy.
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Focal malformations of cortical development (MCD) are linked to somatic brain mutations occurring during neurodevelopment. Mild malformation of cortical development with oligodendroglial hyperplasia in epilepsy (MOGHE) is a newly recognized clinico-pathological entity associated with pediatric drug-resistant focal epilepsy, and amenable to neurosurgical treatment. MOGHE is histopathologically characterized by clusters of increased oligodendroglial cell densities, patchy zones of hypomyelination, and heterotopic neurons in the white matter.

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Background: Megalencephaly-capillary malformation-polymicrogyria syndrome (MCAP) belongs to a group of conditions called the PIK3CA-related overgrowth spectrum (PROS). The varying phenotypes and low frequencies of each somatic mosaic variant make confirmative diagnosis difficult. We present 12 patients who were diagnosed clinically and genetically with MCAP.

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Tumor-related leukocytosis (TRL) is correlated with poor survival in various types of cancers, but the microenvironment of TRL-associated human tumors has not been fully elucidated. Here, we aimed to characterize the immune microenvironment of cancer patients with TRL. The transcriptional signatures of tumor tissues obtained from cervical cancer patients with (TRL) and without TRL (TRL) were compared.

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Low-level somatic mutations have been shown to be the major genetic etiology of intractable epilepsy. The extents thereof, however, have yet to be systematically and accurately explored in a large cohort of resected epilepsy brain tissues. Moreover, clinically useful and precise analysis tools for detecting low-level somatic mutations from unmatched formalin-fixed paraffin-embedded (FFPE) brain samples, the most clinically relevant samples, are still lacking.

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The homeodomain is found in hundreds of transcription factors that play roles in fate determination via cell-autonomous regulation of gene expression. However, some homeodomain-containing proteins (HPs) are thought to be secreted and penetrate neighboring cells to affect the recipient cell fate. To determine whether this is a general characteristic of HPs, we carried out a large-scale validation for intercellular transfer of HPs.

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Objective: To identify whether somatic mutations in alter N-glycan structures in human brain tissues and cause nonlesional focal epilepsy (NLFE) or mild malformation of cortical development (mMCD).

Methods: Deep whole exome and targeted sequencing analyses were conducted for matched brain and blood tissues from patients with intractable NLFE and patients with mMCD who are negative for mutations in mTOR pathway genes. Furthermore, tissue glyco-capture and nanoLC/mass spectrometry analysis were performed to examine N-glycosylation in affected brain tissue.

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Background: Current transcranial ultrasound stimulation for small animal in vivo experiment is limited to acute stimulation under anesthesia in stereotaxic fixation due to bulky and heavy curved transducers.

Methods: We developed a miniaturized ultrasound ring array transducer which is capable of invoking motor responses through neuromodulation of freely-moving awake mice.

Results: The developed transducer is a 32-element, 183-kHz ring array with a weight of 0.

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