Publications by authors named "Nakama M"

Congenital contractual arachnodactyly (CCA) is a genetic connective tissue disorder that is characterized by arachnodactyly, kyphoscoliosis, marfanoid habitus, and crumpled ears. We report a case of a boy with suspected Marfan syndrome. Genetic analysis revealed c.

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Article Synopsis
  • * Whole-exome sequencing (WES) is a common technique for identifying genetic causes, but many cases still remain unsolved, prompting researchers to explore other methods.
  • * The study combined whole genome sequencing (WGS) and RNA sequencing (RNA-seq) to successfully identify previously undetected pathogenic variants, leading to a diagnosis of developmental and epileptic encephalopathies linked to the ITPA gene.
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Coronavirus disease 2019 (COVID-19) is caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). A serological test is used to assess the efficacy of vaccination. It has been reported that anti-SARS-CoV-2 spike (S) and neutralizing antibody (Ab) levels are lower following vaccination in patients with rheumatic disease.

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Serological detection of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) nucleocapsid (N), spike (S), and neutralizing antibodies (Abs) is commonly undertaken to evaluate the efficacy of vaccination. However, the relative efficiency of different SARS-CoV-2 Ab detection systems has not been extensively investigated. Here, we evaluated serological test systems in vaccinated Japanese.

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Article Synopsis
  • The study evaluates the effectiveness of serological tests for detecting anti-SARS-CoV-2 nucleocapsid (N) and spike (S) antibodies in COVID-19 patients and a control group in Japan.
  • The highest positivity rates for these antibodies were observed more than 14 days after symptom onset, with N antibodies showing a slightly higher positivity rate than S antibodies.
  • The research proposes lowering cut-off levels for antibody positivity to enhance the sensitivity of COVID-19 serological tests, suggesting that both N and S antibodies should be measured for improved diagnostics.
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Depression and anxiety have been associated with cigarette use among young people. Higher impulsivity has also been associated with increased smoking behavior. However, relatively less is known about the associations between depression, anxiety, impulsivity and e-cigarette use and how these associations compare with the associations between depression, anxiety, impulsivity and cigarette smoking.

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To test the mechanisms by which exposure to point-of-sale (POS) e-cigarette marketing mediate the relationship between an ethnic minority group highly vulnerable for tobacco product use, namely Native Hawaiian/Other Pacific Islander (NHPI), and increased future e-cigarette use through explicit (positive outcome expectancies) and implicit (spontaneous positive reactions) pathways. Four waves of data were collected in 6-month intervals from 2,327 multiethnic young adults ( = 21.2, = 2.

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The loss-of-function variants of the human asparagine synthetase (ASNS) gene cause asparagine synthetase deficiency (ASNSD). Diagnosis of ASNSD requires genetic tests because a specific biochemical diagnostic for ASNSD is not available. There are a few reports describing the functional evaluation of ASNS variants.

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The photoreactive protein rhodopsin is widespread in microorganisms and has a variety of photobiological functions. Recently, a novel phylogenetically distinctive group named 'schizorhodopsin (SzR)' has been identified as an inward proton pump. We performed functional and spectroscopic studies on an uncharacterised schizorhodopsin from the phylum Lokiarchaeota archaeon.

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Mitochondrial 3-hydroxy-3-methylglutaryl-CoA synthase (HMGCS2) deficiency is a metabolic disorder caused by mutations in the gene. The present study describes the identification of four cases of HMGCS2 deficiency in Japan. Hepatomegaly and severe metabolic acidosis were observed in all cases.

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Background: Although maternal MeHg-exposure causes hydrocephalus in the offspring of mice, its pathogenesis has not been fully explained. In the present study, we examined the issue of how maternal MeHg-exposure in mice affects ependymal ciliary movement in the offspring and whether the lateral ventricles in offspring show dilation.

Methods: Pregnant mice were given drinking water containing 0, 10, or 20 mg/L MeHg, or a single dose of 2 mg/kg MeHg.

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We encountered a patient with mitochondrial trifunctional protein deficiency in whom the corresponding mutations were not identified by a DNA panel for newborn screening for targeted diseases. After diagnosis confirmation by an enzyme assay and immunoblotting using the autopsied liver, the re-evaluation of the panel data indicated a heterozygous deletion of exons 6-9 that was later confirmed at the genomic level. cDNA analysis also identified exonization of the 5' region of intron 9 caused by a deep intronic mutation, c.

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Objectives: Haploinsufficiency of A20 (HA20) due to loss-of-function mutations of leads to an autoinflammatory disease. These mutations produce a premature termination codon in most cases of HA20. However, exon deletion has not been reported.

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Article Synopsis
  • The study aims to evaluate different diagnostic methods for detecting Clostridioides difficile infection (CDI) in patients with significant diarrhea across 12 medical facilities in Japan, comparing them to the gold standard of toxigenic culture (TC).
  • Key findings indicated that nucleic acid amplification tests (NAAT) showed higher sensitivity (74%) compared to enzyme immunoassays (EIA) (41%) and performed similarly to the GDH algorithm (71%).
  • Overall, NAAT and the GDH algorithm demonstrated good negative predictive values (92% and 91%, respectively) but highlighted the complexity of choosing the optimal diagnostic approach amid varying performance metrics for CDI detection.
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We describe the case of a 4-year-old boy who suffered from frequent ketotic hypoglycemia (KH) but did not have hepatomegaly or elevated liver enzyme levels. However, the patient was found to have a rare variant in the gene. To detect the underlying disease in this case, we performed a gene panel analysis covering 59 genes that are involved in fatty acid oxidation, ketone body metabolism and transport, and glycogen storage diseases.

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Article Synopsis
  • The original publication had an oversight where a part of a figure was left out.
  • Specifically, part d of Figure 2 was not included in the initial release.
  • This omission needs to be addressed for accurate interpretation of the data presented.
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Lynch syndrome is a cancer-predisposing syndrome inherited in an autosomal-dominant manner, wherein colon cancer and endometrial cancer develop frequently in the family, it results from a loss-of-function mutation in one of four different genes (MLH1, MSH2, MSH6, and PMS2) encoding mismatch repair proteins. Being located immediately upstream of the MSH2 gene, EPCAM abnormalities can affect MSH2 and cause Lynch syndrome. Mismatch repair proteins are involved in repairing of incorrect pairing (point mutations and deletion/insertion of simple repetitive sequences, so-called microsatellites) that can arise during DNA replication.

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  • Activation of the AKT pathway in neuroblastoma is linked to poor patient outcomes, making it a target for treatment.
  • This study investigates the AMPAR antagonist perampanel's effects on human neuroblastoma cells, focusing on cell proliferation and key signaling pathways.
  • Results show that perampanel inhibits neuroblastoma cell growth by lowering AKT and ERK pathway activity without inducing cell death, indicating its potential as a treatment option.
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Clostridioides (Clostridium) difficile is the leading cause of healthcare-associated infectious diarrhea in the developed world. Retrospective studies have shown a lower incidence of C. difficile infection (CDI) in Japan than in Europe or North America.

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Pleuropulmonary blastoma (PPB) is a rare, progressive, and aggressive malignant intrathoracic tumor observed during childhood. Mutations in the DICER1 gene have been considered a major etiologic factor of PPB and cause a variety of tumor types in children and young adults. We present a 3-year-old boy with type II PPB.

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Several species of Aeromonas produce the enzyme CphA metallo-β-lactamase. This study describes an isolate of Aeromonas hydrophila harbouring an acquired gene encoding the carbapenemase GES-24. This isolate was obtained from an inpatient in Okinawa, Japan, with no apparent record of travelling overseas.

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Alu elements occupy 10% of the human genome. However, although they contribute to genomic and transcriptomic diversity, their function is still not fully understood. We hypothesized that intronic Alu elements may contribute to alternative splicing.

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Purpose: Anhidrotic ectodermal dysplasia with immunodeficiency (EDA-ID) is caused by mutations in the NF-κB essential modulator (NEMO) or NF-κB inhibitor, alpha (IKBA) genes. A heterozygous NEMO mutation causes incontinentia pigmenti (IP) in females, while a hemizygous hypomorphic mutation of NEMO causes EDA-ID in males. In general, immunodeficiency is not shown in IP patients.

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