Publications by authors named "Nagata Noriyo"

Article Synopsis
  • Viral RNA synthesis of mononegaviruses, like the mumps virus (MuV), occurs in specialized cytoplasmic regions called inclusion bodies (IBs) that have liquid-like properties due to liquid-liquid phase separation.
  • Research findings show that MuV IBs have a cage-like structure formed by viral proteins and the viral polymerase that spatially aligns with viral RNAs.
  • The analysis also revealed that host RNAs with G-quadruplex motifs (G4-RNAs) are concentrated in MuV IBs, and these G4-RNAs enhance the formation of these structures by interacting with a specific viral protein.
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Unlabelled: A critical aspect of the mechanism of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection is the protease-mediated activation of the viral spike (S) protein. The type II transmembrane serine protease TMPRSS2 is crucial for SARS-CoV-2 infection in lung epithelial Calu-3 cells and murine airways. However, the importance of TMPRSS2 needs to be re-examined because the ability to utilize TMPRSS2 is significantly reduced in the Omicron variants that spread globally.

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Asthma, an allergic disease of the airways, is a risk factor for severity of common respiratory viral infections; however, the relationship between asthma and severity in COVID-19 remains unclear. Here, we examined the effects of SARS-CoV-2 (Omicron BA.5 strain) infection in a mouse model of airway allergy.

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  • A study investigated how susceptible domestic cats are to SARS-CoV-2, including different variants like gamma, delta, and omicron.
  • Researchers found that cats inoculated with wild-type, gamma, and delta variants could shed the virus for a week and showed no severe symptoms even after being infected with a small amount of the virus.
  • While cats developed a strong immune response to the earlier variants, the study revealed that the omicron variant was less effective at replicating in cats and elicited a weaker immune response.
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Article Synopsis
  • - Reports indicate that SARS-CoV-2, the virus causing COVID-19, can be transmitted from humans to various mammals, with some animals showing severe symptoms and even dying in rare cases.
  • - In a Japanese zoo from late 2022 to 2023, an outbreak of the SARS-CoV-2 omicron variant occurred, affecting 24 lions where 13 showed respiratory issues and three older lions died.
  • - Analysis revealed that the deceased lions were infected with the omicron variant, while all lions tested had antibodies against it, highlighting the need for ongoing measures to protect unvaccinated animals from the virus.
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Introduction: Severe dengue is thought to be caused by an excessive host immune response.

Methods: To study the pathogenesis of severe dengue, we developed a novel model using LysM Cre mice carrying depleted expression only in subsets of murine myeloid cells.

Results: Although dengue virus (DENV) clinical isolates were not virulent in LysM Cre mice, mouse-adapted DV1-5P7Sp and DV3P12/08P4Bm, which were obtained by passaging the spleen or bone marrow of mice, demonstrated 100% lethality with severe vascular leakage in the liver and small intestine.

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Article Synopsis
  • The study evaluated the LC16m8 vaccine's safety and effectiveness against the monkeypox virus (MPXV) in 50 healthy adults over 168 days.
  • On day 28, the vaccine showed strong immunogenicity, with 72% to 88% seroconversion rates, although these rates declined by day 168.
  • Adverse events were common but mostly mild, and no serious safety issues or cases of monkeypox were reported during the study period.
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Introduction: Severe fever with thrombocytopenia syndrome (SFTS) is a fatal viral disease characterized by high fever, thrombocytopenia, leukopenia, and multi-organ haemorrhage. Disruption of the humoral immune response and decreased lymphocyte numbers are thought to contribute to the disease severity. These findings have been obtained through the analysis of peripheral blood leukocytes in human patients, whereas analysis of lymph nodes has been limited.

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Heartland virus (HRTV) causes generalized symptoms, severe shock, and multiple organ failure. We previously reported that interferon-α/β receptor knockout (IFNAR) mice infected intraperitoneally with 1 × 10 tissue culture-infective dose (TCID) of HRTV died, while those subcutaneously infected with the same dose of HRTV did not. The pathophysiology of IFNAR mice infected with HRTV and the mechanism underlying the difference in disease severity, which depends on HRTV infection route, were analyzed in this study.

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Dengue is a major health problem in tropical and subtropical regions. Some patients develop a severe form of dengue, called dengue hemorrhagic fever, which can be fatal. Severe dengue is associated with a transient increase in vascular permeability.

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Article Synopsis
  • SARS-CoV-2 nucleocapsid protein (NP) is crucial for COVID-19 diagnostic tests like PCR and antigen rapid diagnostic tests (Ag-RDTs).
  • Ag-RDTs are more user-friendly than PCR, allowing for easier point-of-care and self-testing to detect the virus.
  • The study identified two high-affinity antibodies targeting distinct sites on NP, improving the sensitivity and specificity of Ag-RDTs, showcasing the effectiveness of high-throughput antibody isolation methods for enhancing diagnostic tools.
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  • A study evaluated how well the serum from individuals who had breakthrough infections with different SARS-CoV-2 variants could neutralize those variants, which is key for creating better COVID-19 booster vaccines.
  • The research used Bayesian hierarchical modeling to analyze the effects of the time period between vaccination and infection, finding that different variants require different durations (2-4 months) to achieve optimal immune response saturation.
  • The findings emphasize the need for longer vaccine dosage intervals (at least 4 months) to effectively enhance the immune response against various Omicron variants, regardless of their genetic differences from the original strain.
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  • A case-control study was conducted to assess COVID-19 infection risk among healthcare workers, collecting data on demographics, contact behaviors, and protective equipment usage.
  • Out of 1,899 participants, 161 (8.5%) were found to be seropositive, with physical contact and aerosol-generating procedures significantly increasing risk.
  • The use of goggles and N95 masks effectively reduced the risk of infection, and seroprevalence was notably higher in outbreak wards compared to COVID-19 dedicated wards.
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  • - The study explores the potential for reinfection of hamsters previously infected with various SARS-CoV-2 variants, especially the Omicron variant (BA.1), revealing that diverse mutations can occur upon reinfection despite some level of immune response.
  • - Results showed that while viral replication was suppressed in the hamsters' respiratory systems after reinfection, RNA from the virus was still detected, particularly in the upper airways, suggesting that prior infections may not completely prevent reinfection.
  • - Histological analysis indicated no severe disease or acute pneumonia upon reinfection, with only a slight increase in inflammatory markers in the airways, highlighting a relatively mild response compared to initial infections.
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Background: In early 2020, developing vaccines was an urgent need for preventing COVID-19 from a contingency perspective.

Methods: S-268019-a is a recombinant protein-based vaccine against severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), comprising a modified recombinant spike protein antigen adjuvanted with agatolimod sodium, a Toll-like receptor-9 agonist. In the preclinical phase, it was administered intramuscularly twice at a 2-week interval in 7-week-old mice.

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Vaccines that efficiently target severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the etiological agent for coronavirus disease (COVID-19), are the best means for controlling viral spread. This study evaluated the efficacy of the COVID-19 vaccine S-268019-b, which comprises the recombinant full-length SARS-CoV-2 spike protein S-910823 (antigen) and A-910823 (adjuvant). In addition to eliciting both Th1-type and Th2-type cellular immune responses, two doses of S-910823 plus A-910823 induced anti-spike protein IgG antibodies and neutralizing antibodies against SARS-CoV-2.

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Although hepatitis A virus (HAV) is associated only with acute hepatitis in humans, HAV RNA persists within the liver for months following resolution of liver inflammation and cessation of fecal virus shedding in chimpanzees and murine models of hepatitis A. Here, we confirm striking differences in the kinetics of HAV RNA clearance from liver versus serum and feces in infected mice and investigate the nature of viral RNA persisting in the liver following normalization of serum alanine aminotransferase (ALT) levels. Fecal shedding of virus produced in hepatocytes declined >3,000-fold between its peak at day 14 and day 126, whereas intrahepatic HAV RNA declined only 32-fold by day 154.

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Article Synopsis
  • - SARS-CoV-2, including the Omicron variant, can infect cells through various pathways, but recent research highlights a less significant role of the furin/TMPRSS2 pathway for Omicron.
  • - Omicron primarily enters cells by a cathepsin-dependent endocytosis pathway, even though its spike protein is efficiently cleaved.
  • - Studies using TMPRSS2-knockout mice reveal that TMPRSS2 is essential for the infection of SARS-CoV-2 variants, including Omicron, in the airways, emphasizing the need to consider this when studying different variants.
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To control the coronavirus disease 2019 (COVID-19) pandemic, there is a need to develop vaccines to prevent infection with severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants. One candidate is a nasal vaccine capable of inducing secretory IgA antibodies in the mucosa of the upper respiratory tract, the initial site of infection. However, regarding the development of COVID-19 vaccines, there is concern about the potential risk of inducing lung eosinophilic immunopathology as a vaccine-associated enhanced respiratory disease as a result of the T helper 2 (Th2)-dominant adaptive immune response.

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Ebola virus (EBOV) VP30 regulates viral genome transcription and replication by switching its phosphorylation status. However, the importance of VP30 phosphorylation and dephosphorylation in other viral replication processes such as nucleocapsid and virion assembly is unclear. Interestingly, VP30 is predominantly dephosphorylated by cellular phosphatases in viral inclusions, while it is phosphorylated in the released virions.

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The vaccine S-268019-b is a severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) spike (S)-protein vaccine consisting of full-length recombinant SARS-CoV-2 S-protein (S-910823) as antigen, mixed with the squalene-based adjuvant A-910823. The current study evaluated the immunogenicity of S-268019-b using various doses of S-910823 and its vaccine efficacy against SARS-CoV-2 challenge in cynomolgus monkeys. The different doses of S-910823 combined with A-910823 were intramuscularly administered twice at a 3-week interval.

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Putative subcomponent vaccines of severe acute respiratory syndrome coronavirus spike protein and ARNAX (TLR3-specific adjuvant for priming dendritic cells) were examined and compared with spike protein + Alum in a mouse BALB/c model. Survival, body weight, virus-neutralizing Ab titer in the blood, and viral titer in the lung were evaluated for prognosis markers. The infiltration degrees of eosinophils in the lung were histopathologically monitored at 10 d postinfection.

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Monoclonal antibody therapy is a promising option for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection, and a cocktail of antibodies (REGN-COV) has been administered to infected patients with a favorable outcome. However, it is necessary to continue generating novel sets of monoclonal antibodies with neutralizing activity because viral variants can emerge that show resistance to the currently utilized antibodies. Here, we isolated a new cocktail of antibodies, EV053273 and EV053286, from peripheral blood mononuclear cells derived from convalescent patients infected with wild-type SARS-CoV-2.

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Effective vaccines are essential for the control of the coronavirus disease 2019 (COVID-19) pandemic. Currently developed vaccines inducing severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) spike (S)-antigen-specific neutralizing antibodies (NAbs) are effective, but the appearance of NAb-resistant S variant viruses is of great concern. A vaccine inducing S-independent or NAb-independent SARS-CoV-2 control may contribute to containment of these variants.

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