Publications by authors named "N Plomp"

Objectives: Fusobacterium can contribute to oral diseases, but also pose as a systemic risk factor. This genus, and especially F. nucleatum, can be found in colorectal cancer (CRC) tissue and is involved in multiple aspects of this type of cancer.

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Article Synopsis
  • The human gut microbiota is crucial for health, with specific families like Lachnospiraceae and Oscillospiraceae often lacking in disease conditions, yet they're not well-represented in lab cultures.
  • This study introduces a new culturomics platform that uses a simple growth medium combined with MALDI-TOF MS technology to quickly isolate and identify many gut bacteria, successfully cultivating 724 unique isolates from just 11 fecal samples.
  • The research also developed a new database, MaldiGut, that enhances bacterial identification by providing profiles for various species, thus facilitating further investigation of these important but underexplored microbial families.
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Background: Chronic diarrhea is a common cause of mortality and morbidity in captive rhesus macaques (Macaca mulatta). The exact etiology of chronic diarrhea in macaques remains unidentified. The occurrence of diarrhea is frequently linked to dysbiosis within the gut microbiome.

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Objectives: The genus Faecalibacterium is one of the most important butyrate producers in the human intestinal tract and has been widely linked to health. Recently, several different species have been described, but still more phylogroups have been identified, suggesting that additional species may exist. Four strains HTF-F, HTF-128, HTF-75H and HTF-76H, representing two different phylogenetic clusters, are evaluated in this study.

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Although the impact of host genetics on gut microbial diversity and the abundance of specific taxa is well established, little is known about how host genetics regulates the genetic diversity of gut microorganisms. Here we conducted a meta-analysis of associations between human genetic variation and gut microbial structural variation in 9,015 individuals from four Dutch cohorts. Strikingly, the presence rate of a structural variation segment in Faecalibacterium prausnitzii that harbours an N-acetylgalactosamine (GalNAc) utilization gene cluster is higher in individuals who secrete the type A oligosaccharide antigen terminating in GalNAc, a feature that is jointly determined by human ABO and FUT2 genotypes, and we could replicate this association in a Tanzanian cohort.

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