Hydrodesulfurization of Dibenzothiophene: A Machine Learning Approach.

The hydrodesulfurization (HDS) process is widely used in the industry to eliminate sulfur compounds from fuels. However, removing dibenzothiophene (DBT) and its derivatives is a challenge. Here, the key aspects that affect the efficiency of catalysts in the HDS of DBT were investigated using machine learning (ML) algorithms.

Seeking potential anticonvulsant agents that target GABAA receptors using experimental and theoretical procedures.

The aim of this study was to identify compounds that possess anticonvulsant activity by using a pentylenetetrazol (PTZ)-induced seizure model. Theoretical studies of a set of ligands, explored the binding affinities of the ligands for the GABA(A) receptor (GABA(A)R), including some benzodiazepines. The ligands satisfy the Lipinski rules and contain a pharmacophore core that has been previously reported to be a GABA(A)R activator.

Fundamental thermochemical properties of amino acids: gas-phase and aqueous acidities and gas-phase heats of formation.

The gas-phase acidities of the 20 L-amino acids have been predicted at the composite G3(MP2) level. A broad range of structures of the neutral and anion were studied to determine the lowest energy conformer. Excellent agreement is found with the available experimental gas-phase deprotonation enthalpies, and the calculated values are within experimental error.

Thermodynamic properties of the XO(2), X(2)O, XYO, X(2)O(2), and XYO(2) (X, Y = Cl, Br, and I) isomers.

High level ab initio electronic structure calculations at the coupled cluster level with a correction for triples extrapolated to the complete basis set limit have been made for the thermodynamics of the BrBrO(2), IIO(2), ClBrO(2), ClIO(2), and BrIO(2) isomers, as well as various molecules involved in the bond dissociation processes. Of the BrBrO(2) isomers, BrOOBr is predicted to be the most stable by 8.5 and 9.

Dehydrogenation reactions of cyclic C(2)B(2)N(2)H(12) and C(4)BNH(12) isomers.

The energetics for different dehydrogenation pathways of C(2)B(2)N(2)H(12) and C(4)BNH(12) cycles were calculated at the B3LYP/DGDZVP2 and G3(MP2) levels with additional calculations at the CCSD(T)/complete basis set level. The heats of formation of the different isomers were calculated from the G3(MP2) relative energies and the heats of formation of the most stable isomers of c-C(2)B(2)N(2)H(6), c-C(2)B(2)N(2)H(12), and c-C(4)BNH(12) at the CCSD(T)/CBS including additional corrections together with the previously reported value for c-C(4)BNH(6). Different isomers were analyzed for c-C(2)B(2)N(2)H(x) and c-C(4)BNH(x) (x = 6 and 12), and the most stable cyclic structures were those with C-C-B-N-B-N and C-C-C-C-B-N sequences, respectively.

The effect of the NH2 substituent on NH3: hydrazine as an alternative for ammonia in hydrogen release in the presence of boranes and alanes.

Potential energy surfaces for H(2) release from hydrazine interacting with borane, alane, diborane, dialane and borane-alane were constructed from MP2/aVTZ geometries and zero point energies with single point energies at the CCSD(T)/aug-cc-pVTZ level. With one borane or alane molecule, the energy barrier for H(2)-loss of approximately 38 or 30 kcal mol(-1) does not compete with the B-N or Al-N bond cleavage ( approximately 30 or approximately 28 kcal mol(-1)). The second borane or alane molecule can play the role of a bifunctional catalyst.

Thermochemistry and electronic structure of small boron and boron oxide clusters and their anions.

Thermochemical properties of a set of small boron (B(n)) and boron oxide (B(n)O(m)) clusters, with n = 1-4 and m = 0-3, their anions, and the B(4)(2-) dianion, were calculated by using coupled-cluster theory CCSD(T) calculations with the aug-cc-pVnZ (n = D, T, Q, 5) basis sets extrapolated to the complete basis set limit with additional corrections. Enthalpies of formation, bond dissociation energies, singlet-triplet or doublet-quartet separation gaps, adiabatic electron affinities (EA), and both vertical electron attachment and detachment energies were evaluated. The predicted heats of formation show agreement close to the error bars of the literature results for boron oxides with the largest error for OBO.

Coordination of aminoborane, NH(2)BH(2), dictates selectivity and extent of H(2) release in metal-catalysed ammonia borane dehydrogenation.

In situ(11)B NMR monitoring, computational modeling, and external trapping studies show that selectivity and extent of H(2) release in metal-catalysed dehydrogenation of ammonia borane, NH(3)BH(3), are determined by coordination of reactive aminoborane, NH(2)BH(2), to the metal center.

Mechanism of the hydration of carbon dioxide: direct participation of H2O versus microsolvation.

Thermochemical parameters of carbonic acid and the stationary points on the neutral hydration pathways of carbon dioxide, CO 2 + nH 2O --> H 2CO 3 + ( n - 1)H 2O, with n = 1, 2, 3, and 4, were calculated using geometries optimized at the MP2/aug-cc-pVTZ level. Coupled-cluster theory (CCSD(T)) energies were extrapolated to the complete basis set limit in most cases and then used to evaluate heats of formation. A high energy barrier of approximately 50 kcal/mol was predicted for the addition of one water molecule to CO 2 ( n = 1).

ClClO2 is the most stable isomer of Cl2O2. Accurate coupled cluster energetics and electronic spectra of Cl2O2 isomers.

High level ab initio electronic structure calculations at the coupled cluster level with a correction for triples (CCSD(T)) extrapolated to the complete basis set limit have been made for the thermodynamics of the Cl2O2 isomers: ClClO2, ClOOCl, and ClOClO. The ClClO2 isomer is predicted to be the most stable isomer and is more stable than ClOOCl by 3.1 kcal/mol at 298 K.

Reactions of diborane with ammonia and ammonia borane: catalytic effects for multiple pathways for hydrogen release.

High-level electronic structure calculations have been used to construct portions of the potential energy surfaces related to the reaction of diborane with ammonia and ammonia borane (B2H6 + NH3 and B2H6 + BH3NH3)to probe the molecular mechanism of H2 release. Geometries of stationary points were optimized at the MP2/aug-cc-pVTZ level. Total energies were computed at the coupled-cluster CCSD(T) theory level with the correlation-consistent basis sets.

Thermochemical parameters of CHFO and CF2O.

Thermochemical properties of CHFO and CF 2O and their derivatives were calculated by using coupled-cluster theory (U)CCSD(T) calculations with the aug-cc-pV nZ ( n = D, T, Q, 5) basis sets extrapolated to the complete basis set limit with additional corrections. The predicted properties include the following. Enthalpies of formation (298 K, kcal/mol): Delta H f (CF 2O) = -144.

Bond dissociation energies in second-row compounds.

Heats of formation at 0 and 298 K are predicted for PF3, PF5, PF3O, SF2, SF4, SF6, SF2O, SF2O2, and SF4O as well as a number of radicals derived from these stable compounds on the basis of coupled cluster theory [CCSD(T)] calculations extrapolated to the complete basis set limit. In order to achieve near chemical accuracy (+/-1 kcal/mol), additional corrections were added to the complete basis set binding energies based on frozen core coupled cluster theory energies: a correction for core-valence effects, a correction for scalar relativistic effects, a correction for first-order atomic spin-orbit effects, and vibrational zero-point energies. The calculated values substantially reduce the error limits for these species.

Energetics and mechanism of the decomposition of trifluoromethanol.

The thermal instability of alpha-fluoroalcohols is generally attributed to a unimolecular 1,2-elimination of HF, but the barrier to intramolecular HF elimination from CF3OH is predicted to be 45.1 +/- 2 kcal/mol. The thermochemical parameters of trifluoromethanol were calculated using coupled-cluster theory (CCSD(T)) extrapolated to the complete basis set limit.

Heats of formation of triplet ethylene, ethylidene, and acetylene.

Heats of formation of the lowest triplet state of ethylene and the ground triplet state of ethylidene have been predicted by high level electronic structure calculations. Total atomization energies obtained from coupled-cluster CCSD(T) energies extrapolated to the complete basis set limit using correlation consistent basis sets (CBS), plus additional corrections predict the following heats of formation in kcal/mol: DeltaH0r(C2H4,3A1) = 80.1 at 0 K and 78.

Coupled-cluster study of the electronic structure and energetics of tetrasulfur, S4.

Ab initio electronic structure calculations are reported for S4. Geometric and energetic parameters are calculated using the singles and doubles coupled-cluster method, including a perturbutional correction for connected triple excitation, CCSD(T), together with systematic sequences of correlation consistent basis sets extrapolated to the complete basis set limit. The geometry for the ground state singlet C2v structure of S4 is in good agreement with the microwave structure determined for S4.

Computational study of the release of H2 from ammonia borane dimer (BH3NH3)2 and its ion pair isomers.

High-level electronic structure calculations have been used to map out the relevant portions of the potential energy surfaces for the release of H2 from dimers of ammonia borane, BH3NH3 (AB). Using the correlation-consistent aug-cc-pVTZ basis set at the second-order perturbation MP2 level, geometries of stationary points were optimized. Relative energies were computed at these points using coupled-cluster CCSD(T) theory with the correlation-consistent basis sets at least up to the aug-cc-pVTZ level and in some cases extrapolated to the complete basis set limit.

Heats of formation of boron hydride anions and dianions and their ammonium salts [BnHmy-][NH4+]y with y=1-2.

Thermochemical parameters of the closo boron hydride BnHn2- dianions, with n=5-12, the B3H8- and B11H14- anions, and the B5H9 and B10H14 neutral species were predicted by high-level ab initio electronic structure calculations. Total atomization energies obtained from coupled-cluster CCSD(T)/complete basis set (CBS) extrapolated energies, plus additional corrections were used to predict the heats of formation of the simplest BnHmy- species in the gas phase in kcal/mol at 298 K: DeltaHf(B3H8-)=-23.1+/-1.

Reliable predictions of the thermochemistry of boron-nitrogen hydrogen storage compounds: BxNxHy, x = 2, 3.

Thermochemical data calculated using ab initio molecular orbital theory are reported for 16 BxNxHy compounds with x = 2, 3 and y > or = 2x. Accurate gas-phase heats of formation were obtained using coupled cluster with single and double excitations and perturbative triples (CCSD(T)) valence electron calculations extrapolated to the complete basis set (CBS) limit with additional corrections including core/valence, scalar relativistic, and spin-orbit corrections to predict the atomization energies and scaled harmonic frequencies to correct for zero point and thermal energies and estimate entropies. Computationally cheaper calculations were also performed using the G3MP2 and G3B3 variants of the Gaussian 03 method, as well as density functional theory (DFT) using the B3LYP functional.

Heats of formation of diphosphene, phosphinophosphinidene, diphosphine, and their methyl derivatives, and mechanism of the borane-assisted hydrogen release.

The heats of formation of diphosphene (cis- and trans-P2H2), phopshinophosphinidene (singlet and triplet H2PP) and diphosphine (P2H4), as well as those of the P2H and P2H3 radicals resulting from PH bond cleavages, have been calculated by using high-level ab initio electronic structure theory. Energies were calculated using coupled-cluster theory with a perturbative treatment for triple excitations (CCSD(T)) and employing augmented correlation consistent basis sets with additional tight d-functions on P (aug-cc-pV(n+d)Z) up to quadruple- or quintuple-zeta, to perform a complete basis set extrapolation for the energy. Geometries and vibrational frequencies were determined with the CCSD(T) method.

Molecular mechanism for H2 release from BH3NH3, including the catalytic role of the Lewis acid BH3.

Electronic structure calculations using various methods, up to the coupled-cluster CCSD(T) level, in conjunction with the aug-cc-pVnZ basis sets with n = D, T, and Q, extrapolated to the complete basis set limit, show that the borane molecule (BH3) can act as an efficient bifunctional acid-base catalyst in the H2 elimination reactions of XHnYHn systems (X, Y = C, B, N). Such a catalyst is needed as the generation of H2 from isoelectronic ethane and borane amine compounds proceeds with an energy barrier much higher than that of the X-Y bond energy. The asymptotic energy barrier for H2 release is reduced from 36.

Theoretical prediction of the heats of formation of C2H5O* radicals derived from ethanol and of the kinetics of beta-C-C scission in the ethoxy radical.

Thermochemical parameters of three C(2)H(5)O* radicals derived from ethanol were reevaluated using coupled-cluster theory CCSD(T) calculations, with the aug-cc-pVnZ (n = D, T, Q) basis sets, that allow the CC energies to be extrapolated at the CBS limit. Theoretical results obtained for methanol and two CH(3)O* radicals were found to agree within +/-0.5 kcal/mol with the experiment values.