Publications by authors named "Mushtak T S Al-Ouqaili"

Background: An important chance of nosocomial acquired infections are caused by the opportunistic bacterium Klebsiella pneumoniae. Urine, wound, sputum, and blood samples were collected from all patients. This study aimed to detect the antibiotic resistance profile, the frequency of MDR, XDR, PDR, and detection of efflux pump and outer membrane permeability genes in K.

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  • - The study investigates bacterial vaginosis (BV) as a common cause of vaginal discharge and evaluates the effectiveness of two diagnostic methods: Amsel's criteria and Nugent's score.
  • - Out of 135 samples analyzed, 44.4% had BV and 22.2% showed *Candida albicans* vaginitis, with Amsel's criteria displaying high sensitivity (94.7%) and specificity (92.3%) when compared to Nugent's score.
  • - The findings suggest the importance of using Amsel's and Nugent's methods for diagnosing BV, highlight the link between recurrent BV and vulvovaginal candidiasis, and stress the need for further research on biofilms formed
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The recent approach towards combating the antimicrobial resistance has led to the use of Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) and associated sequence to overcome the challenges of antimicrobial resistance. Thus, this study aimed to detect the underlying resistance mechanisms such as ESBLs and carbapenemases and whether there is a correlation between multidrug, extensive drug and pan drug resistance and the occurrence of CRISPR loci. A total of one hundred study isolates were subjected to antimicrobial susceptibility testing using the AST card of the Vitek technique to detect resistance patterns involving ESBLs and carbapenemase (CRE).

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Most clinical miscarriages often occur throughout the first trimester of pregnancy, with fetal chromosomal abnormalities being identified as the primary reason for such occurrences. The objective is to analyze the fetal chromosomal aberrations in the product of conception among Iraqi patients suffering from recurrent miscarriages. The cross-sectional study was performed on 60 cases of products of conception in women suffering from multiple miscarriages, obtained from Department of Obstetrics and Gynecology is located in Ramadi Teaching Hospital for Child and Maternity, as well as other Private Clinics in the Ramadi City.

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Cancer drug resistance remains a formidable challenge in modern oncology, necessitating innovative therapeutic strategies. The convergence of intricate regulatory networks involving long non-coding RNAs, microRNAs, and pivotal signaling pathways has emerged as a crucial determinant of drug resistance. This review underscores the multifaceted roles of lncRNAs and miRNAs in orchestrating gene expression and cellular processes, mainly focusing on their interactions with specific signaling pathways.

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Vitamin D (VD) potentially has a crucial function in the development of cancerous cells. This study aims to detect the role of vitamin D concentration and its receptor polymorphisms as possible prognostic biomarkers in patients with leukemia/lymphoma and further will attempt to detect the presence of the Philadelphia chromosome abnormality in chronic myeloid leukemia (CML). Seventy-five patients, in addition to 50 healthy individuals were included.

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  • Helicobacter pylori, a bacterial stomach pathogen, infects about 50% of the global population and is linked to serious health issues like ulcers and stomach cancer.
  • The study aimed to analyze vacA genotypes in infected patients, using PCR on 115 stomach samples, to understand their association with conditions and clarithromycin resistance.
  • Results showed 70.4% had H. pylori, with a notable correlation between certain vacA strains and peptic ulcers; vacA-positive strains had higher clarithromycin resistance, indicating the importance of genetic testing for effective treatment.
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<b>Background and Objective:</b> The pathogenesis of PCOS, which affects 5-15% of women of reproductive age, is still poorly understood and which characteristic might be considered essential for its diagnosis is still unknown. This study aimed to determine the significance and relationship between Anti-Mullerian Hormone (AMH) and other infertility hormones in the Polycystic Ovarian Syndrome (PCOS) diagnosis. <b>Materials and Methods:</b> This study involves 200 women who visited Al-Ramadi Maternity and Child Teaching Hospital in Al-Ramadi, Iraq from October, 2022 to May, 2023.

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Antimicrobial resistance, with the production of extended-spectrum β-lactamases (ESBL) and carbapenemases, is common in the opportunistic pathogen, . This organism has a genome that can contain clustered regularly interspaced short palindromic repeats (CRISPRs), which operate as a defense mechanism against external invaders such as plasmids and viruses. This study aims to determine the association of the CRISPR/Cas systems with antibiotic resistance in isolates from Iraqi patients.

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  • * The research involved a sample of 70 women, categorized into primary amenorrhea (PA) and secondary amenorrhea (SA), and compared to a control group of 30 healthy women, using methods like karyotyping and sequencing for analysis.
  • * Findings revealed that Turner Syndrome was a common chromosomal abnormality in PA, while specific genetic variants in the FSHR gene were linked to both PA and SA, highlighting the importance of genetic testing in managing these conditions.
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Background: Antibiotic resistance is currently the most serious global threat to the effective treatment of bacterial infections. Antibiotic resistance has been established to adversely affect both clinical and therapeutic outcomes, with consequences ranging from treatment failures and the need for expensive and safer alternative drugs to the cost of higher rates of morbidity and mortality, longer hospitalization, and high-healthcare costs. The search for new antibiotics and other antimicrobials continues to be a pressing need in humanity's battle against bacterial infections.

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  • The study investigated the presence of CRISPR-Cas system genes in enterococci species isolated from hospital wastewater, focusing on their relationship with antibiotic resistance patterns.
  • Using samples collected over several months, researchers identified 85 enterococci species, confirming that 54 of them contained CRISPR-Cas loci.
  • The findings indicated that isolates with CRISPR-Cas genes exhibited significantly lower rates of antibiotic resistance, particularly in multidrug-resistant strains, suggesting a potential protective role of these genes against antibiotic resistance.
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Background: Parental chromosomal aberrations are important causes of recurrent pregnancy loss (RPL). Some immunological factors such as antiphospholipid antibodies and interleukin-6 (IL-6) also contribute to this complication. The aim of this study was to determine the frequency of chromosomal abnormalities and to evaluate some of the immunological factors in couples with RPL from different cities in Iraq.

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  • - This study focused on analyzing the presence of azoospermia factor a (AZFa) microdeletions in the Y chromosome and their potential link to male infertility in Iraqi men with azoospermia and severe oligozoospermia.
  • - Among 75 infertile males, 61.3% had AZFa microdeletions, with a higher prevalence in azoospermic individuals (72.5%) compared to those with severe oligozoospermia (48.6%).
  • - The research concluded that partial AZFa microdeletions are more common than complete deletions and highlighted the need for further investigation of these microdeletions in infertile patients.
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  • Peptic ulcer disease, chronic gastritis, and stomach cancer are primarily caused by bacterial infections, with clarithromycin being the preferred antibiotic; however, resistance to this drug often occurs due to specific gene mutations.
  • The study aimed to assess how resistant the bacteria are to clarithromycin, identify minimum inhibitory concentrations for different antimicrobials, and analyze mutations in Iraqi patients through gastro-endoscopy.
  • Results indicated a significant rate of antimicrobial resistance among bacterial isolates, with high occurrences of the A2143G and A2144G mutations, making it crucial to address these resistance mechanisms in treatment strategies.
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  • There is currently no consensus on the best diagnostic method for H. pylori in Iraq, leading to limited data on the effectiveness of various techniques.
  • This study evaluated the prevalence of H. pylori among 115 Iraqi patients by comparing multiple diagnostic methods, including invasive and non-invasive tests, with qPCR as the gold standard.
  • Findings revealed a prevalence rate of 47.8% to 70.4%, with the 14C-Urea Breath Test (UBT) showing the highest accuracy and sensitivity, suggesting it as the preferred diagnostic option in the absence of a universal standard.
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The SEN virus (SENV) has been linked to transfusion-associated non-A-E hepatitis; however, information regarding SENV infections in patients with thalassemia, particularly in those with hepatitis virus co-infections, remains limited. This study investigated the frequency of SENV (genotypes D and H) infections in Iraqi patients with thalassemic patients infected and not infected with hepatitis C virus. The study involved 150 β-thalassemia patients (75 with HCV infections and 75 without) and 75 healthy blood donors.

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Objectives: To evaluate the potential probiotic properties of Lactobacillus strains isolated from feces of infants and also to determine their antimicrobial activity against some enteropathogenic bacteria.

Methods: The Fecal samples were prepared from 120 infants aged less than 24 months. In total, 105 Lactobacillus strains were identified by phenotypic tests.

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