In chronic lymphocytic leukemia, the reliability of next-generation sequencing (NGS) to detect variants ≤10% allelic frequency (low-VAF) is debated. We tested the ability to detect 23 such variants in 41 different laboratories using their NGS method of choice. The sensitivity was 85.
View Article and Find Full Text PDFAlzheimer's disease is a neurodegenerative chronic disease with a severe social and economic impact in the societies, which still lacks an efficient therapy. Several pathophysiological events (β-amyloid [Aβ] deposits, τ-protein aggregation, loss of cholinergic activity, and oxidative stress) occurs in the progression of the disease. Therefore, the search for efficient multi-targeted agents for the treatment of Alzheimer's disease becomes indispensable.
View Article and Find Full Text PDFMitochondrial carriers transport organic acids, amino acids, nucleotides and cofactors across the mitochondrial inner membrane. These transporters consist of a three-fold symmetric bundle of six transmembrane α-helices that encircle a pore with a central substrate binding site, whose alternating access is controlled by a cytoplasmic and a matrix gate (C- and M-gates). The C- and M-gates close by forming two different salt-bridge networks involving the conserved motifs [YF][DE]XX[KR] on the even-numbered and PX[DE]XX[KR] on the odd-numbered transmembrane α-helices, respectively.
View Article and Find Full Text PDFIn this work we report for the first time the presence of 59 species of Cerambycidae (4 species of Prioninae, 25 species of Cerambycinae, and 30 species of Lamiinae) in Mato Grosso do Sul. One of these species, Ozodes infuscatus Bates, 1870, is also recorded from the Brazilian states of São Paulo. Nealcidion bruchi (Melzer, 1934) and Glypthaga arena Galileo, Martins & Santos-Silva, 2015 are recorded from Brazil for the first time.
View Article and Find Full Text PDFThe Baturité massif, situated in Ceará state's central hinterland, is one of the largest humid mountain ranges in the Brazilian semi-arid region. Flora and vertebrate surveys have been conducted in the region, revealing endemic species, as well as a combination of fauna and flora from neighboring biomes, the Atlantic and Amazon rainforests. However, invertebrate inventories have been scarce, leaving a significant portion of the region's biodiversity unexplored.
View Article and Find Full Text PDFEucharitolus Bates, 1885 is divided into two informal groups of species, and its provisional features are reported. The females of Eucharitolus longus Botero & Monné, 2012, and Xenocona senticosa (Monné & Martins, 1976) are described for the first time and both species are newly recorded from Bolivia. New state records are provided for Eucharitolus lituratus (Melzer, 1934) and E.
View Article and Find Full Text PDFCitrate, which is obtained from oxaloacetate and acetyl-CoA by citrate synthase in mitochondria, plays a key role in both normal and cancer cell metabolism. In this work, we investigated the effect of 10 mM extracellular citrate supplementation on HepG2 cells. Gene expression reprogramming was evaluated by whole transcriptome analysis using gene set enrichment analysis (GSEA).
View Article and Find Full Text PDFUp Regulation Gene seven (URG7) is the pseudogene 2 of the transporter ABCC6. The translated URG7 protein is localized with its single transmembrane α-helix in the endoplasmic reticulum (ER) membrane, orienting the N- and C-terminal regions in the lumen and cytoplasm, respectively, and it plays a crucial role in the folding of ER proteins. Previously, the C-terminal region of URG7 (PU, residues 75-99) has been shown to modify the aggregation state of α-synuclein in the lysate of HepG2 cells.
View Article and Find Full Text PDFPhoebella Lane, 1966 is a Neotropical genus of flat-faced longhorned beetles (Cerambycidae, Lamiinae, Hemilophini) with three species. Here, a new species, Phoebella queirozae sp. nov.
View Article and Find Full Text PDFSevere acute respiratory syndrome coronavirus-2 (SARS-CoV-2) is an RNA virus belonging to the coronavirus family responsible for coronavirus disease 2019 (COVID-19). It primarily affects the pulmonary system, which is the target of chronic obstructive pulmonary disease (COPD), for which many new compounds have been developed. In this study, phosphodiesterase 4 (PDE4) inhibitors are being investigated.
View Article and Find Full Text PDFTwo new species of Acanthocinini (Lamiinae) from Mexico are described: Hyperplatys mexicanus sp. nov. from the state of Morelos; and Urgleptes martini sp.
View Article and Find Full Text PDFMyzomorphus Sallé is a charismatic genus of prionine longhorn beetles (Cerambycidae) composed of nine species. Myzomorphus species are found from Costa Rica to southern Brazil, but only two species have wide distributions across this range: M. scutellatus Sallé from Costa Rica to northern Brazil, and M.
View Article and Find Full Text PDFThree new species of Acanthocinini are described: Pseudosparna swifti sp. nov., from Costa Rica; Pseudosparna paulista sp.
View Article and Find Full Text PDFFourteen species are recorded for the first time for Argentina: Amethysphaerion guarani Martins & Napp, 1992 (Cerambycinae, Elaphidiini); Apyrauna annulicornis Martins, 2005 (Cerambycinae, Elaphidiini); Coleoxestia pubicornis (Gounelle, 1909) (Cerambycinae, Cerambycini); Eburodacrys truncata Fuchs, 1956 (Cerambycinae, Eburiini); Ectenessidia nigriventris (Belon, 1902) (Cerambycinae, Ectenessini); Gorybia apatheia Martins, 1976 (Cerambycinae, Piezocerini); Hemilissa sulcicollis Bates, 1870 (Cerambycinae, Piezocerini); Pronoplon rubriceps (Gounelle, 1909) (Cerambycinae, Hexoplonini); Callisema rufipes Martins & Galileo 1990 (Lamiinae, Calliini); Recchia goiana Martins & Galileo, 1985 (Lamiinae, Aerenicini); Rosalba approximata (Melzer, 1934) (Lamiinae, Apomecynini); Rosalba digna (Melzer, 1934) (Lamiinae, Apomecynini); Hypsioma steinbachi Dillon & Dillon, 1945 (Lamiinae, Onciderini); Trypanidius maculatus Monné & Delfino, 1980 (Lamiinae, Acanthocinini).
View Article and Find Full Text PDFFour new species are described: Urgleptes noguerai sp. nov. (Acanthocinini), from Mexico; Styloleptus charynae sp.
View Article and Find Full Text PDFThree new species and one new genus of Bolivian Acanthocinini are described: Lepturges (Lepturges) auratus sp. nov.; Leptostylus dentatus sp.
View Article and Find Full Text PDFMitochondrial carriers (MCs) belong to a eukaryotic protein family of transporters that in higher organisms is called the solute carrier family 25 (SLC25). All MCs have characteristic triplicated sequence repeats forming a 3-fold symmetrical structure of a six-transmembrane α-helix bundle with a centrally located substrate-binding site. Biochemical characterization has shown that MCs altogether transport a wide variety of substrates but can be divided into subfamilies, each transporting a few specific substrates.
View Article and Find Full Text PDFLentiviruses, including equine infectious anemia virus (EIAV), are considered viral quasispecies because of their intrinsic genetic, structural and phenotypic variability. Immunoenzymatic tests (ELISA) for EIAV reported in the literature were obtained mainly by using the capsid protein p26, which is derived almost exclusively from a single strain (Wyoming), and do not reflect the great potential epitopic variability of the EIAV quasispecies. In this investigation, the GenBank database was exploited in a systematic approach to design a set of representative protein antigens useful for EIAV serodiagnosis.
View Article and Find Full Text PDFS-adenosyl-L-methionine (SAM) is a coenzyme and the most commonly used methyl-group donor for the modification of metabolites, DNA, RNA and proteins. SAM biosynthesis and SAM regeneration from the methylation reaction product S-adenosyl-L-homocysteine (SAH) take place in the cytoplasm. Therefore, the intramitochondrial SAM-dependent methyltransferases require the import of SAM and export of SAH for recycling.
View Article and Find Full Text PDFMitochondrial carriers, which transport metabolites, nucleotides, and cofactors across the mitochondrial inner membrane, have six transmembrane α-helices enclosing a translocation pore with a central substrate binding site whose access is controlled by a cytoplasmic and a matrix gate (M-gate). The salt bridges formed by the three PX[DE]XX[RK] motifs located on the odd-numbered transmembrane α-helices greatly contribute to closing the M-gate. We have measured the transport rates of cysteine mutants of the charged residue positions in the PX[DE]XX[RK] motifs of the bovine oxoglutarate carrier, the yeast GTP/GDP carrier, and the yeast NAD transporter, which all lack one of these charged residues.
View Article and Find Full Text PDFThe subfamily Cerambycinae, one of the most diverse in longhorn beetles, is well known for its remarkable chemical parsimony in male-emitted pheromones. Conserved shared structural motifs have been reported in numerous species, sometimes working in combination with plant volatile kairomones. Among other compounds, the most ubiquitous male pheromone in cerambycine species is 3-hydroxyhexan-2-one.
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