CRISPR-Hybrid: A CRISPR-Mediated Intracellular Directed Evolution Platform for RNA Aptamers.

Recent advances in gene editing and precise regulation of gene expression based on CRISPR technologies have provided powerful tools for the understanding and manipulation of gene functions. Fusing RNA aptamers to the sgRNA of CRISPR can recruit cognate RNA-binding protein (RBP) effectors to target genomic sites, and the expression of sgRNA containing different RNA aptamers permit simultaneous multiplexed and multifunctional gene regulations. Here, we report an intracellular directed evolution platform for RNA aptamers against intracellularly expressed RBPs.

Utility of Toll-Free Interactive Voice Response System (IVRS) Helpline under National Oral Health Program (NOHP) - A Cross-Sectional Hospital Based Study.

Background: India launched the National Oral Health Program (NOHP) in the year 2014-15 to support the states for improved oral healthcare delivery and reduce the burden of oral diseases. The toll-free Interactive Voice Response System (IVRS) with contact number 1800112032, was initiated to deliver oral health-related information to users and guide them for proper treatment on World Oral Health Day on 20th March 2017. There is scarcity of data regarding the utility and perception of users about IVRS.

A timely update on g-CN-based photocatalysts towards the remediation of Cr(vi) in aqueous streams.

Hexavalent chromium (Cr(vi)) is a prominent carcinogen. In environmental engineering, the elimination of hexavalent chromium from aqueous media is a noteworthy field of study. In this regard, nanoparticle science and technology have contributed significantly to the photocatalytic reduction of Cr(vi).

Facile fabrication of B-rGO/ZnFeO p-n heterojunction-based S-scheme exciton engineering for photocatalytic Cr(vi) reduction: kinetics, influencing parameters and detailed mechanism.

The fabrication of p-n heterostructures was found to be an effective strategy to stimulate the interfacial exciton shipment and photocatalytic reactions. Herein, we report a p-n junction synthesized by combining p-type boron-doped reduced graphene oxide (B-rGO) with an n-type ZnFeO semiconducting material for Cr(vi) reduction under LED light irradiation. The band structures of ZnFeO and B-rGO were evaluated using UV-vis spectroscopy, Mott-Schottky (M-S) plots and photocurrent studies.

Facilitated Visible-Light-Driven Peroxymonosulfate Activation by a Co-Fe Layered Double Hydroxide Derived p-n Heterostructure for Sulfadiazine Degradation: Affecting Parameters, Kinetics, and Mechanistic Insights.

The utilization of multivalence ionic metal species generated through a peroxymonosulfate (PMS)-assisted photocatalytic system is a promising platform for the selective degradation of water contaminants. However, achieving an effective electron transport and enhanced separation efficiency for these metal species is a daunting challenge. Thus, our current study addresses this challenge by using a Co-Fe-based layered-double-hydroxide template to synthesize a CoO/FeCoO p-n heterojunction composite via a simple monosynthetic route.

Characterizing Grain Boundary Effects on Mg Conduction in Metal-Organic Frameworks.

Next-generation materials for fast ion conduction have the potential to revolutionize battery technology. Metal-organic frameworks (MOFs) are promising candidates for achieving this goal. Given their structural diversity, the design of efficient MOF-based conductors can be accelerated by a detailed understanding and accurate prediction of ion conductivity.

Heparan sulfate glycomimetics iterative assembly of "clickable" disaccharides.

Heparan sulfate (HS) glycosaminoglycans are widely expressed on the mammalian cell surfaces and extracellular matrices and play important roles in a variety of cell functions. Studies on the structure-activity relationships of HS have long been hampered by the challenges in obtaining chemically defined HS structures with unique sulfation patterns. Here, we report a new approach to HS glycomimetics based on iterative assembly of clickable disaccharide building blocks that mimic the disaccharide repeating units of native HS.

Precise Steric Features Control Aminoacyl-tRNA Accommodation on the Ribosome.

Protein synthesis involves a complex series of large-scale conformational changes in the ribosome. While long-lived intermediate states of these processes can be characterized by experiments, computational methods can be used to identify the interactions that contribute to the rate-limiting free-energy barriers. To this end, we use a simplified energetic model to perform molecular dynamics (MD) simulations of aminoacyl-tRNA (aa-tRNA) accommodation on the ribosome.

Diffuse Ions Coordinate Dynamics in a Ribonucleoprotein Assembly.

Proper ionic concentrations are required for the functional dynamics of RNA and ribonucleoprotein (RNP) assemblies. While experimental and computational techniques have provided many insights into the properties of chelated ions, less is known about the energetic contributions of diffuse ions to large-scale conformational rearrangements. To address this, we present a model that is designed to quantify the influence of diffuse monovalent and divalent ions on the dynamics of biomolecular assemblies.

SMOG 2 and OpenSMOG: Extending the limits of structure-based models.

Applying simulations with structure-based models has proven to be an effective strategy for investigating the factors that control biomolecular dynamics. The common element of these models is that some (or all) of the intra/inter-molecular interactions are explicitly defined to stabilize an experimentally determined structure. To facilitate the development and application of this broad class of models, we previously released the SMOG 2 software package.

Influence of the extent of enzymatic hydrolysis on the functional properties of protein hydrolysates from visceral waste of .

The study aimed to evaluate the extent of hydrolysis on the functional properties of fish protein hydrolysates from fish wastes. Fish protein hydrolysate (FPH) was prepared from the visceral waste of Rohu () using Alcalase. Independent variables of the hydrolysis conditions, namely, time, temperature and enzyme-substrate ratio were optimized through response surface methodology using a completely randomized factorial design.

Molecular-Level Insights into Selective Transport of Mg in Metal-Organic Frameworks.

Metal-organic frameworks (MOF) are promising media for achieving solid-state Mg conduction and developing a magnesium-based battery. To this end, the chemical behavior and transport properties of an Mg(TFSI)/DME electrolyte system inside Mg-MOF-74 were studied by density functional theory (DFT). We found that inside the MOF chemical environment, solvent and anion molecules occupy the coordinatively unsaturated open metal sites of Mg-MOF-74, while Mg ions adsorb directly onto the carboxylate group of the MOF organic linker.

Effect of feeding habits of fish on the characteristics of collagenolytic proteases isolated from the visceral waste.

In this study, influence of feeding habits of fish on the activity of collagenolytic proteases (CP) has been investigated. CP from the visceral waste of freshwater fish (Pangas, Rohu and Common carp) of different feeding habits was isolated and partially purified by 2-steps, (NH)SO fractionation and dialysis. Enzymatic activity and purification fold was determined in each step.

Effect of hormonal stimulation on captive broodstock maturation, induced breeding and spawning performance of striped snakehead, Channa striata (Bloch, 1793).

In the present study, there was assessment of effects of gonadotropin treatments on broodstock maturation, induced breeding, and spawning outcomes of striped snakehead in captivity. The striped snakehead (n = 128) were equally distributed in four concrete tanks (15 m) and hormone implants (500 IU human chorionic gonadotropin (hCG)/kg body weight) were inserted intramuscularly and striped snakehead broodstock administered this treatment were confined in two tanks and striped snakehead of a non-implanted group were confined in two tanks. The hormone implanted striped snakehead had a greater (P < 0.

Author Correction: On the processes influencing rapid intensity changes of tropical cyclones over the Bay of Bengal.

An amendment to this paper has been published and can be accessed via a link at the top of the paper.

A steric gate controls P/E hybrid-state formation of tRNA on the ribosome.

The ribosome is a biomolecular machine that undergoes multiple large-scale structural rearrangements during protein elongation. Here, we focus on a conformational rearrangement during translocation, known as P/E hybrid-state formation. Using a model that explicitly represents all non-hydrogen atoms, we simulated more than 120 spontaneous transitions, where the tRNA molecule is displaced between the P and E sites of the large subunit.

A rare case report of infant ileal atresia with double appendix.

Introduction: Small bowel atresia has quite an incidence in infants particularly in males. It is usually seen to be the most common cause of bowel obstruction in neonates since birth. It may be associated with other congenital anomalies.

A community-based pragmatic, controlled trial for preventing and reducing oral diseases among 1-6-year-old children visiting Anganwadi centers, under the Integrated Child Development Scheme, India.

Background: Early childhood caries (ECC) has reached epidemic proportions affecting millions of children worldwide. Its prevention becomes imperative owing to the significant morbidity and financial implications involved with its treatment. The Integrated Child Development Scheme (ICDS), launched in India to provide mid-day meals, pre-school education and primary healthcare to children, can be utilised to counsel and deliver oral health education to mothers.

Fluctuation Effects in the Adam-Gibbs Model of Cooperative Relaxation.

A generalization of the Adam-Gibbs model of relaxation in glass-forming liquids is formulated that takes into account fluctuation in the number of molecules inside the cooperative region. The configurational fraction links the excess entropy with kinetic properties described in the Adam-Gibbs model. We express the configurational fraction at the glass-transition temperature in terms of the width of the distribution of relaxation times, the nonlinearity parameter that demarcates the variations of the relaxation time with structure and temperature, the steepness index that is proportional to the slope of the logarithm of the relaxation time with respect to temperature, the excess heat capacity under constant pressure, and the number of correlated molecules or structural units.

A Metal-Organic Framework Thin Film for Selective Mg Transport.

The incompatibility between the anode and the cathode chemistry limits the used of Mg as an anode. This issue may be addressed by separating the anolyte and the catholyte with a membrane that only allows for Mg transport. Mg-MOF-74 thin films were used as the separator for this purpose.

Using SMOG 2 to Simulate Complex Biomolecular Assemblies.

Over the last 20 years, the application of structure-based (Gō-like) models has ranged from protein folding with coarse-grained models to all-atom representations of large-scale molecular assemblies. While there are many variants that may be employed, the common feature of these models is that some (or all) of the stabilizing energetic interactions are defined based on the knowledge of a particular experimentally obtained conformation. With the generality of this approach, there was a need for a versatile computational platform for designing and implementing this class of models.

On the processes influencing rapid intensity changes of tropical cyclones over the Bay of Bengal.

We present a numerical investigation of the processes that influenced the contrasting rapid intensity changes in Tropical Cyclones (TC) Phailin and Lehar (2013) over the Bay of Bengal. Our emphasis is on the significant differences in the environments experienced by the TCs within a few weeks and the consequent differences in their organization of vortex-scale convection that resulted in their different rapid intensity changes. The storm-relative proximity, intensity, and depth of the subtropical ridge resulted in the establishment of a low-sheared environment for Phailin and a high-sheared environment for Lehar.

High-resolution gridded soil moisture and soil temperature datasets for the Indian monsoon region.

High-resolution soil moisture/temperature (SM/ST) are critical components of the growing demand for fine-scale products over the Indian monsoon region (IMR) which has diverse land-surface characteristics. This demand is fueled by findings that improved representation of land-state help improve rainfall/flood prediction. Here we report on the development of a high-resolution (4 km and 3 hourly) SM/ST product for 2001-2014 during Indian monsoon seasons (June-September).