Publications by authors named "Mohamed-Amine Bani"

The double inactivation of TP53 and RB1 is considered typical of neuroendocrine carcinomas (NECs) but is assumed to be rare in high-grade neuroendocrine tumors (NETs). The immunohistochemical determination of the p53 and Rb status has therefore been proposed as a diagnostic tool. We studied this status in a large series of high-grade neuroendocrine neoplasms, from multiple origins, in order to (a) assess the patterns observed in the different histopathological categories, (b) compare them between the various anatomic sites, and (c) evaluate their possible diagnostic relevance.

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WHO CLASSIFICATION 2022, BETHESDA SYSTEM 2023, MOLECULAR BIOLOGY AND MOLECULAR TESTING: Thyroid pathology has experienced significant advances with the publication of the 5th edition of the World Health Organization classification of endocrine tumors in 2022 and the third edition of the Bethesda system for thyroid cytopathology in 2023. At the same time, the availability of next-generation sequencing data coupled with numerous translational research projects have considerably increased our knowledge of the genomics and mechanics of thyroid cancers, enabling us to refine prognosis and propose new targeted therapies. In this review, we will take up the main new features of the WHO 2022 and Bethesda 2023 classifications, as well as molecular biology findings, with an emphasis on the practical implications for clinicians.

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Introduction: Microsatellite instability (MSI) is a genetic marker that is useful in the detection and treatment of Lynch syndrome (Sd). Although conventional techniques such as immunohistochemistry (IHC) and polymerase chain reaction (PCR) are the standards for MSI detection, the advent of next-generation sequencing (NGS) has offered new possibilities, especially with circulating DNA.

Case Report: We present the case of a 26-year-old patient with Lynch Sd and a -mutated metastatic colon cancer.

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Background & Aims: Patient-derived organoids (PDOs) are promising tumor avatars that could enable ex vivo drug tests to personalize patients' treatments in the frame of functional precision oncology. However, clinical evidence remains scarce. This study aims to evaluate whether PDOs can be implemented in clinical practice to benefit patients with advanced refractory pancreatic ductal adenocarcinoma (PDAC).

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Fertility-sparing treatment (FST) for endometrial carcinoma (EC) is an option for a subgroup of young women with low-risk disease. The low-risk group comprises patients with endometrioid EC stage IA, grade 1, with or without focal lymphovascular invasion. In the era of molecular subtyping, treatment de-escalation for some EC subtypes is recommended.

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Somatic cells that have been partially reprogrammed by the factors Oct4, Sox2, Klf4, and cMyc (OSKM) have been demonstrated to be potentially tumorigenic in vitro and in vivo due to the acquisition of cancer-associated genomic alterations and the absence of OSKM clearance over time. In the present study, we obtained partially reprogrammed, SSEA1-negative cells by transducing murine hepatocytes with Δ1Δ3-deleted adenoviruses that expressed the 4 OSKM factors. We observed that, under long-term 2D and 3D culture conditions, hepatocytes could be converted into LGR5-positive cells with self-renewal capacity that was dependent on 3 cross-signaling pathways: IL6/Jak/Stat3, LGR5/R-spondin, and Wnt/β-catenin.

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Aims: Recently, there have been attempts to improve prognostication and therefore better guide treatment for patients with medullary thyroid carcinoma (MTC). In 2022, the International MTC Grading System (IMTCGS) was developed and validated using a multi-institutional cohort of 327 patients. The aim of the current study was to build upon the findings of the IMTCGS to develop and validate a prognostic nomogram to predict recurrence-free survival (RFS) in MTC.

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Article Synopsis
  • Medullary thyroid cancer (MTC) often has mutations in the RET gene, and while selective RET inhibitors (RETi) are effective treatments, most patients eventually develop resistance to these drugs.
  • A study analyzed 46 MTC patients treated with RETi from 2018 to 2022, finding that 26 discontinued treatment due to progression, death, or toxicity; resistance mechanisms included mutations in RAS genes and others in 75% of cases, and specific RET mutations explained resistance in the remaining 25%.
  • The research revealed that patients' tumors became more aggressive after treatment, indicated by increased Ki 67-index levels and a more poorly differentiated histology, highlighting the need
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The immunodetection of NUT protein is a reliable tool to identify NUT carcinoma, a rare and still underdiagnosed tumor entity. The technique was implemented in 2017 in our department, a tertiary reference center with a large recruitment in all tumor types, including head and neck and thoracic tumors. We evaluated its use over a 6-year period (2017-2022) to (a) describe the indications for the technique, (b) determine the number of NUT carcinomas detected and confirmed by Fluorescence in situ hybridization, and (c) describe briefly the characteristics of these tumors.

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  • - Patient Derived Organoids (PDOs) technology could help develop personalized tumor models to test the effectiveness of cancer treatments, but there are challenges in generating them from limited tumor samples, testing various drugs, and getting quick results for patient care.
  • - In a study on colorectal cancer patients, 25 PDOs were created successfully, showing a 94% match with the original tumor's genomic profile, and a method called 'chemogram' was used to evaluate responses to 25 FDA-approved cancer drugs within a median of 6 weeks.
  • - The results indicated that PDO drug testing can be integrated into standard clinical practices, with the chemogram demonstrating a good predictive capability for patient responses to treatments, achieving 75% sensitivity and specificity
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The prognostic importance of and mutations and their relationship to clinicopathologic parameters and outcomes in medullary thyroid carcinoma (MTC) need to be clarified. A multicenter retrospective cohort study was performed utilizing data from 290 patients with MTC. The molecular profile was determined and associations were examined with clinicopathologic data and outcomes.

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Aims: The International Medullary Thyroid Carcinoma Grading System, introduced in 2022, mandates evaluation of the Ki67 proliferation index to assign a histological grade for medullary thyroid carcinoma. However, manual counting remains a tedious and time-consuming task.

Methods And Results: We aimed to evaluate the performance of three other counting techniques for the Ki67 index, eyeballing by a trained experienced investigator, a machine learning-based deep learning algorithm (DeepLIIF) and an image analysis software with internal thresholding compared to the gold standard manual counting in a large cohort of 260 primarily resected medullary thyroid carcinoma.

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Patients with metastatic medullary thyroid cancer (MTC) who progressed under tyrosine kinase inhibitors can benefit from an alkylating agent such as dacarbazine or temozolomide. We describe two patients with metastatic MTC who developed a hypermutant phenotype after alkylating agent treatment. This phenotype was characterized by a high tumor mutational burden (TMB) and a mutational signature indicative of alkylating agent mutagenesis (single-base substitution 11).

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Background: Despite improvements in characterization of CRC heterogeneity, appropriate risk stratification tools are still lacking in clinical practice. This study aimed to elucidate the primary tumor transcriptomic signatures associated with distinct metastatic routes.

Methods: Primary tumor specimens obtained from CRC patients with either isolated LM (CRC-Liver) or PM (CRC-Peritoneum) were analyzed by transcriptomic mRNA sequencing, gene set enrichment analyses (GSEA) and immunohistochemistry.

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Article Synopsis
  • The study investigates the impact of vascular invasion (lymphatic or venous) on the risk of recurrence in patients with low-risk papillary thyroid carcinoma (PTC).
  • It included 141 patients diagnosed between 2013 and 2019, showing that 20.6% had confirmed lymphovascular invasion.
  • Results indicated that patients with lymphovascular invasion had a higher rate of persistent/recurrent disease, particularly those not treated with radioactive iodine, suggesting the need for better risk assessment in PTC management.
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  • The term "juvenile-like (hyperplastic/inflammatory) mucosal polyp" describes rare benign growths in the gastrointestinal tract, primarily linked to type 1 neurofibromatosis (NF1).
  • A novel case was reported involving a 53-year-old woman with a large polyp in the cecum that exhibited characteristics of inflammation and specific cellular composition, resembling juvenile polyps.
  • Whole exome sequencing revealed a pathogenic variant associated with her condition, suggesting that juvenile-like inflammatory polyps can occur independently of NF1 and warrant further examination in complex gastrointestinal tumors.
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  • Gut dysbiosis is linked to both intestinal and extraintestinal cancers; however, the relationship between cancer development and changes in the microbiome is still unclear.
  • The study found that cancer can cause damage to the ileal mucosa, leading to changes in gut permeability and a rise in Clostridium species, which are associated with dysbiosis.
  • Interventions like β-adrenergic receptor blockers or antibiotics helped prevent the detrimental gut changes linked to tumors, suggesting stress ileopathy is an important condition in cancer that needs targeted treatment.
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Purpose: Medullary thyroid carcinoma (MTC) is an aggressive neuroendocrine tumor (NET) arising from the calcitonin-producing C cells. Unlike other NETs, there is no widely accepted pathologic grading scheme. In 2020, two groups separately developed slightly different schemes (the Memorial Sloan Kettering Cancer Center and Sydney grade) on the basis of proliferative activity (mitotic index and/or Ki67 proliferative index) and tumor necrosis.

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Objectives: A subset of vulvar carcinomas (VC) are associated with human papillomavirus (HPV) DNA. This trait can be used to identify tumor markers for patient's follow-up. A large diversity of HPV prevalence in VC has been reported, but no data are available concerning the insertional HPV status in this tumor type.

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