Publications by authors named "Miri S Park"

A Gram-strain-negative, aerobic, yellow-colored, non-motile, and rod-shaped bacterial strain, designated IMCC34852, was isolated from a freshwater stream in the Republic of Korea. Cellular growth occurred at 10-37 °C, pH 6.0-9.

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Two Gram-stain-negative, aerobic, motile by means of flagella, short rod-shaped bacterial strains, designated IMCC43200 and IMCC45268, were isolated from coastal seawater samples collected from the South Sea of Korea. Strains IMCC43200 and IMCC45268 shared 98.6% 16S rRNA gene sequence similarity and were closely related to Congregibacter litoralis KT71 (98.

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Article Synopsis
  • A new Gram-stain-negative bacterium, IMCC34845, was discovered in a freshwater stream in South Korea, and is characterized as aerobic, motile, and rod-shaped.
  • Phylogenetic analysis linked it closely to 'Achromobacter panacis,' but genetic testing proved that IMCC34845 and related strains are distinct species.
  • The strain's genetic makeup and chemical properties support its classification as a novel species within its genus, leading to the proposal of a new name for it and recommending a reclassification of 'Achromobacter panacis.'
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The name Flavihumibacter fluminis Park et al. 2022, which was effectively published but invalidated, is an illegitimate homonymic epithet of Flavihumibacter fluminis Guo et al. 2023.

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Article Synopsis
  • Eleven new Flavobacterium bacterial strains were isolated from freshwater and identified through gene sequencing, revealing distinct characteristics and genome sizes.
  • The average nucleotide identity analysis showed that two strains belong to the same species, while the others represent separate novel species, each exhibiting low genetic similarity with known Flavobacterium species.
  • The study proposes ten new species, including Flavobacterium praedii and Flavobacterium marginilacus, based on genomic, phylogenetic, and phenotypic evaluations, confirming their uniqueness from existing species.
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A Gram-stain-negative, aerobic, rod-shaped and motile bacterium, designated IMCC34681, was isolated from a lotus wetland in the Republic of Korea. Cellular growth occurred at 10-37 °C (optimum, 30 °C), pH 6-9 (optimum, pH 7) and with 0-2 % (w/v) NaCl (optimum, 0.5 % NaCl).

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Two Gram-stain-positive, aerobic, chemoheterotrophic, non-motile, rod-shaped, and yellow-pigmented bacterial strains, designated IMCC34837 and IMCC34838, were isolated from a freshwater stream. Results of 16S rRNA gene-based phylogenetic analyses showed that strains IMCC34837 and IMCC34838 shared 96.3% sequence similarity and were most closely related to Flavihumibacter profundi Chu64-6-1 (99.

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A Gram-stain-negative, aerobic, chemoheterotrophic, rod-shaped bacterium motile by a polar flagellum, designated IMCC34675, was isolated from Chungju Lake, an artificial freshwater reservoir in Republic of Korea. The 16S rRNA gene sequence analysis indicated that strain IMCC34675 belongs to the genus Uliginosibacterium, sharing ≤ 97.1% sequence similarities with the type strains of the genus.

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A Gram-stain-negative, aerobic, non-motile and rod-shaped bacterium, designated as IMCC34836, was isolated from a freshwater stream. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain IMCC34836 was most closely related to HW001 (of the family ) with 95.6 % sequence similarity and formed a robust clade with HW001.

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Multi-omics approaches, including metagenomics and single-cell amplified genomics, have revolutionized our understanding of the hidden diversity and function of microbes in nature. Even in the omics age, cultivation is an essential discipline in microbial ecology since microbial cultures are necessary to assess the validity of an in silico prediction about the microbial metabolism and to isolate viruses infecting bacteria and archaea. However, the ecophysiological characteristics of predominant freshwater bacterial lineages remain largely unknown due to the scarcity of cultured representatives.

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