Human-machine interactions with clinical phrase prediction system, aligning with Zipf's least effort principle?

The essence of language and its evolutionary determinants have long been research subjects with multifaceted explorations. This work reports on a large-scale observational study focused on the language use of clinicians interacting with a phrase prediction system in a clinical setting. By adopting principles of adaptation to evolutionary selection pressure, we attempt to identify the major determinants of language emergence specific to this context.

Prompt Engineering Paradigms for Medical Applications: Scoping Review.

Background: Prompt engineering, focusing on crafting effective prompts to large language models (LLMs), has garnered attention for its capabilities at harnessing the potential of LLMs. This is even more crucial in the medical domain due to its specialized terminology and language technicity. Clinical natural language processing applications must navigate complex language and ensure privacy compliance.

A Novel Method and Python Library for ECG Signal Quality Assessment.

Electrocardiogram (ECG) is one of the reference cardiovascular diagnostic exams. However, the ECG signal is very prone to being distorted through different sources of artifacts that can later interfere with the diagnostic. For this reason, signal quality assessment (SQA) methods that identify corrupted signals are critical to improve the robustness of automatic ECG diagnostic methods.

Efficient Clinical Information Extraction from Breast Radiology Reports in French.

Radiology reports contain crucial patient information, in addition to images, that can be automatically extracted for secondary uses such as clinical support and research for diagnosis. We tested several classifiers to classify 1,218 breast MRI reports in French from two Swiss clinical centers. Logistic regression performed better for both internal (accuracy > 0.

SIMpat: A Synthetic Benchmark for Similarity Metrics on Patient Representations.

Similarity and clustering tasks based on data extracted from electronic health records on the patient level suffer from the curse of dimensionality and the lack of inter-patient data comparability. Indeed, for many health institutions, there are many more variables, and ways of expressing those variables to represent patients than patients sharing the same set of data. To lower redundancy and increase interoperability one strategy is to map data to semantic-driven representations through medical knowledge graphs such as SNOMED-CT.

Patient Information Summarization in Clinical Settings: Scoping Review.

Background: Information overflow, a common problem in the present clinical environment, can be mitigated by summarizing clinical data. Although there are several solutions for clinical summarization, there is a lack of a complete overview of the research relevant to this field.

Objective: This study aims to identify state-of-the-art solutions for clinical summarization, to analyze their capabilities, and to identify their properties.

Caregivers Interactions with Clinical Autocomplete Tool: A Retrospective Study.

Hospital caregivers report patient data while being under constant pressure. These records include structured information, with some of them being derived from a restricted list of terms. Finding the right term from a large terminology can be time-consuming, harming the clinician's productivity.

Ambulatory Peritoneal Dialysis Analysis Framework.

This paper presents the design of an autonomous tracking device to enhance understanding of ambulatory peritoneal dialysis. The resulting tool aims to serve as a framework for research analysis and a decision support for treatment adjustments in peritoneal dialysis.

Performance of Machine Learning Methods to Classify French Medical Publications.

Many medical narratives are read by care professionals in their preferred language. These documents can be produced by organizations, authorities or national publishers. However, they are often hardly findable using the usual query engines based on English such as PubMed.

A Lightweight and Interpretable Model to Classify Bundle Branch Blocks from ECG Signals.

Automatic classification of ECG signals has been a longtime research area with large progress having been made recently. However these advances have been achieved with increasingly complex models at the expense of model's interpretability. In this research, a new model based on multivariate autoregressive model (MAR) coefficients combined with a tree-based model to classify bundle branch blocks is proposed.

Adaptive Time-Dependent Priors and Bayesian Inference to Evaluate SARS-CoV-2 Public Health Measures Validated on 31 Countries.

With the rapid spread of the SARS-CoV-2 virus since the end of 2019, public health confinement measures to contain the propagation of the pandemic have been implemented. Our method to estimate the reproduction number using Bayesian inference with time-dependent priors enhances previous approaches by considering a dynamic prior continuously updated as restrictive measures and comportments within the society evolve. In addition, to allow direct comparison between reproduction number and introduction of public health measures in a specific country, the infection dates are inferred from daily confirmed cases and confirmed death.

Use of the Systematized Nomenclature of Medicine Clinical Terms (SNOMED CT) for Processing Free Text in Health Care: Systematic Scoping Review.

Background: Interoperability and secondary use of data is a challenge in health care. Specifically, the reuse of clinical free text remains an unresolved problem. The Systematized Nomenclature of Medicine Clinical Terms (SNOMED CT) has become the universal language of health care and presents characteristics of a natural language.

Evaluation of Document Retrieval Systems on a Medical Corpus in French: Indexation vs. Feature Learning.

This paper presents five document retrieval systems for a small (few thousands) and domain specific corpora (weekly peer-reviewed medical journals published in French) as well as an evaluation methodology to quantify the models performance. The proposed methodology does not rely on external annotations and therefore can be used as an ad hoc evaluation procedure for most document retrieval tasks. Statistical models and vector space models are empirically compared on a synthetic document retrieval task.

Emerging Concepts and Applied Machine Learning Research in Patients with Drug-Induced Repolarization Disorders.

The paper presents a review of current research to develop predictive models for automated detection of drug-induced repolarization disorders and shows a feasibility study for developing machine learning tools trained on massive multimodal datasets of narrative, textual and electrocardiographic records. The goal is to reduce drug-induced long QT and associated complications (Torsades-de-Pointes, sudden cardiac death), by identifying prescription patterns with pro-arrhythmic propensity using a validated electronic application for the detection of adverse drug events with data mining and natural language processing; and to compute individual-based predictive scores in order to further identify clinical conditions, concomitant diseases, or other variables that correlate with higher risk of pro-arrhythmic situations.