Publications by authors named "Miguel Hermida"

The arthroscopic remplissage procedure has been described to successfully treat engaging Hill-Sachs lesions and improve shoulder stability. Several variations of this technique have been described, including remplissage with 1 or 2 knotted or knotless anchors, remplissage with double or triple bridging pulleys, and remplissage with or without a subacromial view. However, most techniques use anchors in combination with round sutures.

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Knowledge of genetic structure at the finest level is essential for the conservation of genetic resources. Despite no visible barriers limiting gene flow, significant genetic structure has been shown in marine species. The common cockle (Cerastoderma edule) is a bivalve of great commercial and ecological value inhabiting the Northeast Atlantic Ocean.

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Sex determination (SD) shows huge variation among fish and a high evolutionary rate, as illustrated by the Pleuronectiformes (flatfishes). This order is characterized by its adaptation to demersal life, compact genomes and diversity of SD mechanisms. Here, we assembled the Solea senegalensis genome, a flatfish of great commercial value, into 82 contigs (614 Mb) combining long- and short-read sequencing, which were next scaffolded using a highly dense genetic map (28,838 markers, 21 linkage groups), representing 98.

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Shell color shows broad variation within mollusc species and despite information on the genetic pathways involved in shell construction and color has recently increased, more studies are needed to understand its genetic architecture. The common cockle (Cerastoderma edule) is a valuable species from ecological and commercial perspectives which shows important variation in shell color across Northeast Atlantic. In this study, we constructed a high-density genetic map, as a tool for screening common cockle genome, which was applied to ascertain the genetic basis of color variation in the species.

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Article Synopsis
  • Understanding the environmental factors affecting genome divergence in marine species, like the edible cockle, is essential for sustainable fisheries management and conservation efforts.
  • A population genomics study examined over 9,000 SNPs in 536 cockles from 14 locations in the Northeast Atlantic, revealing significant genetic differentiation and environmental influences such as sea temperature and salinity.
  • The analysis identified two main genetic groups and finer subdivisions related to larval dispersal patterns, providing crucial insights for developing conservation strategies and managing cockle populations.
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An early event in lung oncogenesis is loss of the tumour suppressor gene LIMD1 (LIM domains containing 1); this encodes a scaffold protein, which suppresses tumorigenesis via a number of different mechanisms. Approximately 45% of non-small cell lung cancers (NSCLC) are deficient in LIMD1, yet this subtype of NSCLC has been overlooked in preclinical and clinical investigations. Defining therapeutic targets in these LIMD1 loss-of-function patients is difficult due to a lack of 'druggable' targets, thus alternative approaches are required.

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  • The study focuses on the Rubia Gallega cattle breeding scheme, which uses farm and slaughterhouse data along with genomic evaluation techniques to analyze genetic traits.
  • The researchers employed a single-step genomic method (ssGBLUP) to identify significant genomic regions linked to growth and carcass quality traits, using extensive data records for traits like birth weight and cold carcass weight.
  • They discovered several genomic regions associated with these traits, with some showing pleiotropic effects, implying that certain areas of the genome influence multiple traits simultaneously.
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Background: Understanding sex determination (SD) across taxa is a major challenge for evolutionary biology. The new genomic tools are paving the way to identify genomic features underlying SD in fish, a group frequently showing limited sex chromosome differentiation and high SD evolutionary turnover. Turbot (Scophthalmus maximus) is a commercially important flatfish with an undifferentiated ZW/ZZ SD system and remarkable sexual dimorphism.

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  • The introduction of Next-generation sequencing (NGS) and RAD-seq has dramatically improved the identification and genotyping of molecular markers for various aquatic species, especially those with limited genomic resources.
  • A comparison was made between two bioinformatics pipelines, STACKS 2 and Meyer's 2b-RAD v2.1, using five different species, to evaluate SNP panels, revealing that while there were variations in results, overall genetic diversity within species remained consistent.
  • Although the choice of pipeline had minimal influence on population genetics conclusions, distinct discrepancies were noted between de novo methods and reference genomes, prompting further exploration of different bioinformatic tools.
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  • A Neotropical fish species exhibits hybridization between distinct mitochondrial DNA lineages, making it a unique subject for evolutionary research.
  • The study used population genomics techniques to analyze genetic diversity in key Southern Neotropical Basin ecosystems, revealing significant genomic divergence between northern and southern populations.
  • Findings highlighted candidate genes linked to adaptive traits and underscored the impact of environmental factors on evolution, enhancing our understanding of this fish's evolutionary history.
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Three dimensional (3D) bioprinting of multiple cell types within optimised extracellular matrices has the potential to more closely model the 3D environment of human physiology and disease than current alternatives. In this study, we used a multi-nozzle extrusion bioprinter to establish models of glioblastoma made up of cancer and stromal cells printed within matrices comprised of alginate modified with RGDS cell adhesion peptides, hyaluronic acid and collagen-1. Methods were developed using U87MG glioblastoma cells and MM6 monocyte/macrophages, whilst more disease relevant constructs contained glioblastoma stem cells (GSCs), co-printed with glioma associated stromal cells (GASCs) and microglia.

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  • Selective breeding to improve disease resilience in hosts is an important strategy for controlling infections, focusing on two key traits: resistance (avoiding infection) and endurance (surviving infection).
  • The study conducted an innovative test on turbot to separate these traits, leading to the discovery of significant genetic variation for resistance, endurance, and the overall trait of resilience.
  • A specific genomic region linked to resilience was identified, showing that it holds genes related to immune responses, potentially paving the way for better breeding strategies in aquaculture.
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Unraveling adaptive genetic variation represents, in addition to the estimate of population demographic parameters, a cornerstone for the management of aquatic natural living resources, which, in turn, represent the raw material for breeding programs. The turbot () is a marine flatfish of high commercial value living on the European continental shelf. While wild populations are declining, aquaculture is flourishing in southern Europe.

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The adaptive cellular response to low oxygen tensions is mediated by the hypoxia-inducible factors (HIFs), a family of heterodimeric transcription factors composed of HIF-α and HIF-β subunits. Prolonged HIF expression is a key contributor to cellular transformation, tumorigenesis and metastasis. As such, HIF degradation under hypoxic conditions is an essential homeostatic and tumour-suppressive mechanism.

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Glycogen Synthase Kinase-3 (GSK3 or GSK-3) is a promiscuous protein kinase and its phosphorylation of its diverse substrates has major influences on many areas of physiology and pathology, including cellular metabolism, lineage commitment and neuroscience. GSK3 was one of the first identified substrates of the heavily studied oncogenic kinase AKT, phosphorylation by which inhibits GSK3 activity via the formation of an autoinhibitory pseudosubstrate sequence. This has led to investigation of the role of GSK3 inhibition as a key component of the cellular responses to growth factors and insulin, which stimulate the class I PI 3-Kinases and in turn AKT activity and GSK3 phosphorylation.

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Genetic isolation and drift may imperil peripheral populations of wide-ranging species more than central ones. Therefore, information about species genetic variability and population structure is invaluable for conservation managers. The Iberian populations of three-spined stickleback lie at the southwestern periphery of the European distribution of Gasterosteus aculeatus.

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Flatfish have a high market acceptance thus representing a profitable aquaculture production. The main farmed species is the turbot (Scophthalmus maximus) followed by Japanese flounder (Paralichthys olivaceous) and tongue sole (Cynoglossus semilaevis), but other species like Atlantic halibut (Hippoglossus hippoglossus), Senegalese sole (Solea senegalensis) and common sole (Solea solea) also register an important production and are very promising for farming. Important genomic resources are available for most of these species including whole genome sequencing projects, genetic maps and transcriptomes.

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Loss of function of the PTEN tumour suppressor, resulting in dysregulated activation of the phosphoinositide 3-kinase (PI3K) signalling network, is recognized as one of the most common driving events in prostate cancer development. The observed mechanisms of PTEN loss are diverse, but both homozygous and heterozygous genomic deletions including PTEN are frequent, and often accompanied by loss of detectable protein as assessed by immunohistochemistry (IHC). The occurrence of PTEN loss is highest in aggressive metastatic disease and this has driven the development of PTEN as a prognostic biomarker, either alone or in combination with other factors, to distinguish indolent tumours from those likely to progress.

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Article Synopsis
  • The turbot genome has been sequenced and annotated, aiding in breeding programs and understanding flatfish evolution.* -
  • Comparisons with model fish genomes reveal conserved chromosome structures and gene expansions related to vision and lipid metabolism, indicating adaptations to their environment.* -
  • The research identifies key traits like growth, sex determination, and disease resistance, providing insights for enhancing turbot production through marker-assisted selection.*
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  • Growth traits are crucial in aquaculture breeding, with insights from wild fisheries potentially enhancing breeding programs.* -
  • By using QTL mapping and next-gen sequencing, researchers identified over 20,000 genes and 85,000 SNPs related to growth in turbot, a key flatfish in Europe and China.* -
  • The study validated 43 SNPs linked to growth-related genes, providing a valuable resource for further research in genetic improvement and understanding of this flatfish species.*
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The phosphatase and tensin homologue deleted on chromosome 10 (PTEN) phosphatase dephosphorylates PIP3, the lipid product of the class I PI 3-kinases, and suppresses the growth and proliferation of many cell types. It has been heavily studied, in large part due to its status as a tumour suppressor, the loss of function of which is observed through diverse mechanisms in many tumour types. Here we present a concise review of our understanding of the PTEN protein and highlight recent advances, particularly in our understanding of its localization and regulation by ubiquitination and SUMOylation.

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Different bioprinting techniques have been used to produce cell-laden alginate hydrogel structures, however these approaches have been limited to 2D or simple three-dimension (3D) structures. In this study, a new extrusion based bioprinting technique was developed to produce more complex alginate hydrogel structures. This was achieved by dividing the alginate hydrogel cross-linking process into three stages: primary calcium ion cross-linking for printability of the gel, secondary calcium cross-linking for rigidity of the alginate hydrogel immediately after printing and tertiary barium ion cross-linking for long-term stability of the alginate hydrogel in culture medium.

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In many human cell types, the class I phosphoinositide 3-kinases play key roles in the control of diverse cellular processes including growth, proliferation, survival and polarity. This is achieved through their activation by many cell surface receptors, leading to the synthesis of the phosphoinositide lipid signal, PIP3, which in turn influences the function of numerous direct PIP3-binding proteins. Here we review PI3K pathway biology and analyse the evolutionary distribution of its components and their functions.

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Objectives: Emerging data suggest that several metabolic factors, released mainly by white adipose tissue (WAT) and joint tissues, and collectively named adipokines, might have a role in the pathophysiology of OA. Recently, novel adipokines such as SERPINE2, WISP2, GPNMB and ITIH5 have been identified in WAT. The main goal of this study was to analyse the expression of these novel adipokines in synovium, infrapatellar fat pad and chondrocytes and to compare the expression of these molecules in healthy and OA tissues.

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Article Synopsis
  • The study focuses on developing the first linkage map for the Senegalese sole, a valuable aquaculture species, using microsatellite markers derived from genomic data.
  • Three gynogenetic families were created through chromosome manipulation to help assign microsatellites to linkage groups, resulting in a consensus map with 129 microsatellites across 27 linkage groups.
  • The research also included comparative mapping between flatfish species and model fish, highlighting the significance of the genetic map for future studies on fish evolution and genetics.
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